Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0161 |
Symbol | |
ID | 3677842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | + |
Start bp | 179690 |
End bp | 180892 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637714868 |
Product | periplasmic binding protein |
Protein accession | YP_320062 |
Protein GI | 75812443 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAC TCCCCCACCA AAAACCAATC ATTTTCCTCT GTCAACTATG CCTCATAGCC ACCCTGATCA TCGCCTGTCA TCAAACCACA ATTCACACAT CAACTAACAC CTGTACCCCC AAGTATAACC CTAACCAAGA TTACTTTCCC AATAAAATCA AAATCACCCA CGCCAGAGGT TTGGCGGTAG AATATCACAA ACATTACAAA GTAGTCACCA TCAAAAATCC TTGGCAAAAT GCTAAAACTC AGTTTCAATA TGTTCTAGTC CAATGCGGAA CACCCACACC CCAAGGATTT AAGCAGGCGC AAGTAATTAC AGTTCCTATT AACTCTATAG TTTCTTTATC AACTACACAT TTACCCCACT TAGCTAAATT AGATGTAGTT GATAAATTAA TTGGAGTGAG TAATATTAAA CAAGTCAATA CGCCTGAAGT TATTGAGAGA ATTAAAACCG GAAATATTAC CCAAGTCGGC AATAATTCCA ATGTAGATAT CGAAAAATTA TTAGCCTTAA ATCCCGACTT AGTAACAACC TTCGGCACAG GGAATTCTCA AACTGACAGT TATAGCAAAC TCACAGAAGC TGGTTTAAAG GTGGGGATAA ATGCTGAGTA TATGGAAGAT ACACCATTGG GGAGAAGTGA ATGGTTAAAA TTTACGGCTT TGTTTTTTAA TCAAGAAGCC AAAGCAGAAA AGATATTTAG TGAAATTGCT CAAAAATATA CACAAATAGC TGCAAAAGCT CAATCTGTGA AATACCGTCC GAGTGTATTT GTTGGTTTTA ACTTTAAAGG TACTTGGTTT ATGCCGGCTG GTAATAGTTA TGTTGCTAAA TATCTGGCTG ATGCTGGAGG AAATTATTTG TGGAGTGATG ATAAATCTAA TGGTAGTTTA CCTCTTTCTT TTGAAGTGGT TTTAGAACGT GCAGCTAATG CTGATTATTG GTTGAATTTT AGCCAAGGTT GGCAAAATGT CAAGGATTTA ATAACAGAAG ATAATCGTTA TGCTGATTTT CAAGCTGTGA AAACAGGCAA TCTTTATAAT AACAATGCGC GGGTGAATGC GAATGGTGGT AATGATTACT GGGAAGGGGG AATTAGTAAC CCTGATATTG TGCTTGCAGA TTTAATTAAA ATCCTGCATC CAGAAATATT ACCGAATCAT CAATTGTTTT ATTATCGTAA ATTTAATAAA TAA
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Protein sequence | MIKLPHQKPI IFLCQLCLIA TLIIACHQTT IHTSTNTCTP KYNPNQDYFP NKIKITHARG LAVEYHKHYK VVTIKNPWQN AKTQFQYVLV QCGTPTPQGF KQAQVITVPI NSIVSLSTTH LPHLAKLDVV DKLIGVSNIK QVNTPEVIER IKTGNITQVG NNSNVDIEKL LALNPDLVTT FGTGNSQTDS YSKLTEAGLK VGINAEYMED TPLGRSEWLK FTALFFNQEA KAEKIFSEIA QKYTQIAAKA QSVKYRPSVF VGFNFKGTWF MPAGNSYVAK YLADAGGNYL WSDDKSNGSL PLSFEVVLER AANADYWLNF SQGWQNVKDL ITEDNRYADF QAVKTGNLYN NNARVNANGG NDYWEGGISN PDIVLADLIK ILHPEILPNH QLFYYRKFNK
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