Gene Ava_B0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0161 
Symbol 
ID3677842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp179690 
End bp180892 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content36% 
IMG OID637714868 
Productperiplasmic binding protein 
Protein accessionYP_320062 
Protein GI75812443 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAC TCCCCCACCA AAAACCAATC ATTTTCCTCT GTCAACTATG CCTCATAGCC 
ACCCTGATCA TCGCCTGTCA TCAAACCACA ATTCACACAT CAACTAACAC CTGTACCCCC
AAGTATAACC CTAACCAAGA TTACTTTCCC AATAAAATCA AAATCACCCA CGCCAGAGGT
TTGGCGGTAG AATATCACAA ACATTACAAA GTAGTCACCA TCAAAAATCC TTGGCAAAAT
GCTAAAACTC AGTTTCAATA TGTTCTAGTC CAATGCGGAA CACCCACACC CCAAGGATTT
AAGCAGGCGC AAGTAATTAC AGTTCCTATT AACTCTATAG TTTCTTTATC AACTACACAT
TTACCCCACT TAGCTAAATT AGATGTAGTT GATAAATTAA TTGGAGTGAG TAATATTAAA
CAAGTCAATA CGCCTGAAGT TATTGAGAGA ATTAAAACCG GAAATATTAC CCAAGTCGGC
AATAATTCCA ATGTAGATAT CGAAAAATTA TTAGCCTTAA ATCCCGACTT AGTAACAACC
TTCGGCACAG GGAATTCTCA AACTGACAGT TATAGCAAAC TCACAGAAGC TGGTTTAAAG
GTGGGGATAA ATGCTGAGTA TATGGAAGAT ACACCATTGG GGAGAAGTGA ATGGTTAAAA
TTTACGGCTT TGTTTTTTAA TCAAGAAGCC AAAGCAGAAA AGATATTTAG TGAAATTGCT
CAAAAATATA CACAAATAGC TGCAAAAGCT CAATCTGTGA AATACCGTCC GAGTGTATTT
GTTGGTTTTA ACTTTAAAGG TACTTGGTTT ATGCCGGCTG GTAATAGTTA TGTTGCTAAA
TATCTGGCTG ATGCTGGAGG AAATTATTTG TGGAGTGATG ATAAATCTAA TGGTAGTTTA
CCTCTTTCTT TTGAAGTGGT TTTAGAACGT GCAGCTAATG CTGATTATTG GTTGAATTTT
AGCCAAGGTT GGCAAAATGT CAAGGATTTA ATAACAGAAG ATAATCGTTA TGCTGATTTT
CAAGCTGTGA AAACAGGCAA TCTTTATAAT AACAATGCGC GGGTGAATGC GAATGGTGGT
AATGATTACT GGGAAGGGGG AATTAGTAAC CCTGATATTG TGCTTGCAGA TTTAATTAAA
ATCCTGCATC CAGAAATATT ACCGAATCAT CAATTGTTTT ATTATCGTAA ATTTAATAAA
TAA
 
Protein sequence
MIKLPHQKPI IFLCQLCLIA TLIIACHQTT IHTSTNTCTP KYNPNQDYFP NKIKITHARG 
LAVEYHKHYK VVTIKNPWQN AKTQFQYVLV QCGTPTPQGF KQAQVITVPI NSIVSLSTTH
LPHLAKLDVV DKLIGVSNIK QVNTPEVIER IKTGNITQVG NNSNVDIEKL LALNPDLVTT
FGTGNSQTDS YSKLTEAGLK VGINAEYMED TPLGRSEWLK FTALFFNQEA KAEKIFSEIA
QKYTQIAAKA QSVKYRPSVF VGFNFKGTWF MPAGNSYVAK YLADAGGNYL WSDDKSNGSL
PLSFEVVLER AANADYWLNF SQGWQNVKDL ITEDNRYADF QAVKTGNLYN NNARVNANGG
NDYWEGGISN PDIVLADLIK ILHPEILPNH QLFYYRKFNK