| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_B0147 |
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| Symbol | |
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| ID | 3677934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007410 |
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| Strand | + |
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| Start bp | 162308 |
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| End bp | 163228 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637714854 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_320048 |
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| Protein GI | 75812429 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGAT TCATCTTGAG TTTTAGTATT GCTGTGACGT TTGCATATCT TGTTTTCGCT
GCACCTGCAC ACTCATTATC TACAGTGAAA GAGCCAAATG CAGCGAGTGT ATTTCTCCAG
TCAGGAATAG AGAAATTGTT GCATGGTAAT TACCAAGAAG CTATCGAAAA TTTTAATACG
GCGATTGAGA TACAAAAGGA TTTTGCGCCG GCTTATAGCG ATCGCTGTCT AGCTTATCTA
GAATTAGCAG ATTATCAAAG TGCCATTGCT GATTGCAATC AAGCTCTCAA ATTGACCCCT
GATAATATTG AAGTCCACCT CAATCGGGGA CTAGCATACT ACAGACTAGG GGAATATAGG
CAAGCGATCG CTGACAATAA CCAAGTTATT GTTCTCAAGC CTGATGATTT TAGAGCTTAC
TACAACCGAG GTATAGCCCA GGCAATGTTG GGGAATCATC AACAAGCTAT CTCTGATTAC
AATCTAGCGT TAATCACTAT TCCCCAAACA TCTACTTTAC GTCTTGCAGA TATTTACAAC
GACCGAGGAT TGGCTTGGTT TGAGTTATCA AATTTGCCAA GTGCTATGGA TGATTTCTCC
AAGGCAATTC ATCTCAATCC CCATGACTAT AGAGCTTACT ATAATCGTGG TTGTGCTTGC
GGTAGAAGCG GCGATAACTC TTGTGCCATT AGAGATTTTA CAGCATCACT TCAGCTTCAG
CCTGGCAATG CCCAAGCCTA TCTGAATCGA GGTATAGCTG ATCATCAACT TGGTTATGAA
CAAGCAGCAA TCGCAGATTT ACAAAAGGCT GTAGAGTACT TTGCCCAAGA AGGAGCAACT
ACAAACTACG AAAAAACTTT AAACCTACTG AAAAATTTAC AACAACAACT CTCATCGCAG
TTAGAAATTG CTCTCATCTA G
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| Protein sequence | MNRFILSFSI AVTFAYLVFA APAHSLSTVK EPNAASVFLQ SGIEKLLHGN YQEAIENFNT
AIEIQKDFAP AYSDRCLAYL ELADYQSAIA DCNQALKLTP DNIEVHLNRG LAYYRLGEYR
QAIADNNQVI VLKPDDFRAY YNRGIAQAML GNHQQAISDY NLALITIPQT STLRLADIYN
DRGLAWFELS NLPSAMDDFS KAIHLNPHDY RAYYNRGCAC GRSGDNSCAI RDFTASLQLQ
PGNAQAYLNR GIADHQLGYE QAAIADLQKA VEYFAQEGAT TNYEKTLNLL KNLQQQLSSQ
LEIALI
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