Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_B0124 |
Symbol | |
ID | 3677667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007410 |
Strand | + |
Start bp | 139863 |
End bp | 141335 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637714831 |
Product | transposase IS66 |
Protein accession | YP_320025 |
Protein GI | 75812406 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.34696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAA ACTTGCCTCA AGATTTAGAC AGAGAAAGTT TGAGCCAGTT ATCTAAAGAA GAACTGGTGG ACATCATCAT TGAGCAGAGC AAGGTAATAC GTGAGCTACA AAAGATAATA TTAGAACTAC AGCAAGAAAT AGAGCGTTTA AAAGTCAGCA GAGATTTAGA TAGTTCTAAT TCATCAAAAC CTCCATCACA AGACATTCAC AAAAAAAGCG AAAAAGAAAA AGTGCCTCAC CTTGAGGAAT CAAACCCACC GAAAAAGAAA CCAGGTGGGC AACCAGGACA TCAAGGTAAA ACTCGAAAGG GTTTTGGCAG AGTAGATCGC TATGAAATTT TACGTCCAAC GGATTGCATT TACTGTGGTC AAAAAGCATT TGCACCCCTA GCAGTAAAAG TAGAAAAACA CGCGGTAGCG CAACTAGTAG AATGTCCCAT AGAAATAGTT GAGTATCAAC GCCATACGTG CGTGTGTGAA TGCTGTGGAA ATATACAAAC AGCAGCCTGG CCCCAAGAAA TTATTCCAGG ACAAGATTTA GGAACGTCGT TACAAGCATT TTTAGGGTGG ACAAATAACT ATGCACATAT GCCCTACGAA AAACAGCAGG AAATGCTTTG GGAACTTGGT GAGATTGAAA TTGGATTGGG AACTTTAGTC GCCACCAATG AACGAATACA ACAAGCAATT GAACCGAGTA TTCATGAGTT AAGTAATTGG GTAAAACAGA CACAACCTAA CATCCATGTA GATGAAACAC CTTGGTCAGT TAAAGGGGTT AAAGAATGGT TGTGGGTAGT GGCTAATTCT GAATTCTGCC TGTTTACTGC GGCTGATACT CGTTCTAGAG CCGAACTAGA AGCAATTTTA GGGACTGAGT ATACAGGTGT ACTCAGCAGC GATGATTTTA GTGTTTATAA TGGCTATCAA GCTGTTGCCC AACAGAAATG TTTGGCTCAT CTACGTCGTC ACTTCAAAAA ATTGATTCAA CTTCCCGGTC TTCACAACAA AGCTATCGGC GAAACCTTTG TCAATTTAAT TGATGAAGCC TTCAGAAGTT ATGCTCAATG GTTTGAAACT CTTGACTCAA ACAGTTATAA CGATTGGATA AATCAATTCA AATTCAAGTT GCAATTTTCT GTTGATCAAT GGATTAACTT GGCAGGAGCT ACGGCTGGAA ACCTTTTACG TTCTTTGCGC GATAAAGCAA GCCAATGGTG GTATTTCCTT GACCATCCTG AAGTTCCTCC TGATAATAAT CTCGCTGAAC GCTCGCTGCG TTTAGCTGTG ACAAAACGTA AGGTTAGTGG TGGTTCACGC TCGATGAAGC GGTTTCAACA TACTGCCAAT TTGTTGACGG TAGTGCAGAC TTGTCGCCGT CAAGGTAGGT CTGTTATTGA TTTTTTTGTG CAAGCTCTAA TTGCTGATTC TAATAATTCT CACTCTCGCC CCTCTTTACT TCCGCAATAT TAG
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Protein sequence | MNQNLPQDLD RESLSQLSKE ELVDIIIEQS KVIRELQKII LELQQEIERL KVSRDLDSSN SSKPPSQDIH KKSEKEKVPH LEESNPPKKK PGGQPGHQGK TRKGFGRVDR YEILRPTDCI YCGQKAFAPL AVKVEKHAVA QLVECPIEIV EYQRHTCVCE CCGNIQTAAW PQEIIPGQDL GTSLQAFLGW TNNYAHMPYE KQQEMLWELG EIEIGLGTLV ATNERIQQAI EPSIHELSNW VKQTQPNIHV DETPWSVKGV KEWLWVVANS EFCLFTAADT RSRAELEAIL GTEYTGVLSS DDFSVYNGYQ AVAQQKCLAH LRRHFKKLIQ LPGLHNKAIG ETFVNLIDEA FRSYAQWFET LDSNSYNDWI NQFKFKLQFS VDQWINLAGA TAGNLLRSLR DKASQWWYFL DHPEVPPDNN LAERSLRLAV TKRKVSGGSR SMKRFQHTAN LLTVVQTCRR QGRSVIDFFV QALIADSNNS HSRPSLLPQY
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