Gene Ava_B0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_B0025 
Symbol 
ID3677739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007410 
Strand
Start bp37789 
End bp41373 
Gene Length3585 bp 
Protein Length1194 aa 
Translation table11 
GC content38% 
IMG OID637714734 
Producthypothetical protein 
Protein accessionYP_319928 
Protein GI75812309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.204228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATG AACGACATTT GCAACTCACT TCTGCTTACG ACAGAGCAAG TCAGCATTTT 
ATTAGAGCTT TCATCTATCC TCTAGGTGAG TTTATTTATA AATCCATTGA AGAAGCTATT
GATTTAAAAT GCCGCATCGA AATAGGGGAA GAAACTTATT TCTTAACTCC TGATGAGGAT
GGTGGTTGGA AATGGTCAAA AGGTGAACAG GAAATAACTA ATGAAGAAAT AGAACAAATA
GAAGGAACCC TAGAATACTT ATTACCTAGA CTTTTACCCG GTAGTCATGA TTCAACACCA
CCCAATTTTC CTCCTCCCCC TGATTTACCT CCAGTTTTAC CTAACCCAAA TATTCCTCCA
AGTCTTCCCC CTTCTGGTGA ACTTGTTGAT TTCTTAGCCA TACAAATTGA AAGCAATAAT
ACTCTAGAAT ATCAATACTT ACAAAGCCAA GAAGAAATAT TCTTAACTCC GCCAAACTGG
AGTAATGATT ATGTCATAAA TGATGTTATT GAAATTCAGG ATGTATCAAT AACATCATCT
ACAGAGATTG TGGATGATTC CTCTATTTTA GACGATGCCA ACCCTGATAA AGACTATGAG
CAGAGTCAAG TGATTAATTC TCATGAAATT GCTGATGAGC ATTTAACAGT AGAGTTGATT
AGCAACAACA CAATTCCAAT CAAGAGTGAA AATCTTCGCC CAGAACATAT TGATCCACAA
CATTGGCACG AACTCGTAGT AGACAGTGCG ATCGCTCCTG AGATTGCACA GATGAACTTT
CAAAGTCTTC ACTTTAGCCA GACAAACGGT TCACACGAAG CTTGGGAGCG GTTAATGATC
AGCGAAAACC TACCACGCAC AAATACAGGT AGGCTCTCTG GTGAGATATT GAAAACATAT
TCCTATCTAG ATTTGACAGA CGGCTGGTGG TGTAATGCAG GAGTAGATCC GCGTACTTTT
GAGGGCTTAA ATCCTGGTGA GACTGCCCAC CATAAAGAAT GGGGATGCTA TAAGCCAAAT
CAGCCAAGAC CAAAAAGAGA GCGTGACGGG CAGATAATTG AGGGGAAATT CATTAAATAT
GAACATCCGC CTAAAACTCA ATTGAGTATT TTTTTGTTAG ATGTCCCAGA CAAGATTGCT
CAAAATATTT ACTCCTTGGC TGGAGTAAAC CCCAGCGATA GCGATCGCAC TTCTGGATTT
TGGTATTGCG TATGGAAACA TAACATTTCT ATCACCATTA CTGAGGGTGC AAAGAAAGCG
GCTAGTCTCT TAAGCCAAGG TCATGCTGCC ATCGGGCTAC CGGGAATTTC TGCCGGATAC
CGCACACCTA AAAATGAATG GGGTCAAAAA ATGGGTGATT CCTATTTAGC ACCAGAGTTA
GCTGTTTTCG CTACTAAGAG CAGGGAAATC AAAATCTGCT TTGACTATGA AACTAAACCA
GAAACTAAAC TCAATATCGA CAGGGATATT TGGAAAACAG GAAGTTTGTT ACAAGAATTG
GGTTGTGTAG TGAAAGTAGT AACCTTGCTA GGGCCAGATA AGGGTGTAGA TGATTTTTTA
GTCTCACAAG GAACAGAAGC TTTTGAAAAG TTATCTGCTA TGGCAATATC TCTAGAGCAA
TGGAATAAAA ATAAATTTGA TAATTTACGT TGCACTCTCA AGCTTAAAGA TGGCACAGTC
AGAACAATTT CTGAACCAGG AGACTCTACT TTGACAACAA ATGTCACCCT TGATGAATCA
GAACAAAACA TTGGTGTATT TAAAAAAAAT CGGGCTAAAT CACTTATTAA CCCTAGTTCA
CAAATCATAC ATATAAAAGT TACTGATGCA GAAATTATTG ATGTTGAGGT TATTTCTTCC
AGACAAAATC AACCACTTGA AGGAGCAACT TTACAAAACA CAAGTGGTAC TTCTTGGGCT
AAAAAGGAAA ATGTTACGCT TTATGAGCCT AACTTCTTTA GAAAGCGTCT TGAAGCTAGT
GAGAATAAAC AAATAGCTTC TGCTGCTTAT ACTTTGTTAA AAAAATATGG TGTTGATACT
AAAGATAAAC AACAGCAGAC TATTGGCAAA ATTTACCATG CTGATGCTTT TGTAATTAAG
AATCATGGCG GCGACAAATA CAGTATCCAT CGTCGTCATG ATCATGTAGA GTTAATGACT
TTTCAAGCTG ATAAATGGGG ACACGTAGGC AATATTCAAC TTTCTTACAC CCAAATCAAG
AATGCACTTA AAACTCAGCC AAAAAAACAA ATCAACATTC TGCCGATTGA AAGGCAAGAG
TTTTTGTTAG TGGCTGATGT CATTAAAGCA GGCAAAGAAT TACCATCTGT CGATTGTGAC
CCCCGCAAAA TTGCCTCAAC TCTTTCTTCG CTATCTCCTC AAGGTACACA TAATATTTTA
GAAAGTTTTA AAGAAAAAGA GGTGTTACAA ATCCTGACCC AAACTATCAC TAGTTTTGGA
CAAGATGACT TAACTTTGGG CAATTACCGC ATTCTTTTTG AGCAAAGCAC TGGCACTACA
TCGACTCTAC AACTATTCAA AACCGAACAC AATGGTATTA CTAGGGAAGC CGTAAGATTT
GAATTTGAGC GTACTGAAGC TGGGATAACT CACCAAGTCA AAGCTTTAGC TATTACTGAA
GCTGATTTAG AAAAATTAAG ACTTCTAGCT CAAAAACTGC ATATTAATTA TCAAGCTTTG
TTTGGCAATC CTAATAACAC TCGTGACATC GAATTGCCCC TTCATCCCGA AATTGCCCTT
AATTTAGACT CCGGGCAATC ACCTTCAAAG TATAGAGAGT CTGATGATCA AAGACAACAG
AGTACTGTAT CACAATCAAC TACACCAATA CTTAAAGCCA CAAAACCATC ACAATCTACA
CAACAGCAGA ATTATTCTTT TAATTTAGAT AACGTTGTGC TACCACTGCA TCCAGTTTTG
AAACAATACT GGGAACAGTT AGAACTTGAT GGTTCTGGCA ATAAGTTCGT AGAACAAGGG
CATTTAGAAT TTCAAACTAA AATTCAGCAA ACTGGAACAT TAACCGTTGG TGAACAGCGT
GAACTTTATC AACAGATTCA AAATCAAGCC TGGAACCAGA TTAACCGCAA TGGGCGTACT
GATATTGTAC TGCCAGCATT GGCTGTGATT GTGAATGATT TGCGCTCGCT CTCGCTTCAA
CAATCACAAC CAAACATTTC TTCTGACCCA GCCTGTGATA CACCAATGCC TCTCCACAGA
GATATCGCTG CTCATTGGGA GAATTTAGAA ACCAATAACA CTTGGTTTAG TGTTGCCAAT
CAGTACAACA ATCCTTTACG GAATAAATTA GAAAAAACTG GTAAGCTGAC TATTGGGGAA
CAACGTGAAC TTTACCAGAA AATTCTCCTT CAAAGTCAAG TTGAGCAGCA TAAAAAAGGC
AAAACTGATA TTTTTCTTCC TCCTTTAAGT GATATTGTTC AAGACTTGAT TGATGCTCGT
AGTCAGATAA TTGACCACAC TTATACGCCC AAAGTTGAAG TACATTCTCC TCAGAAATCT
CACACTTCAC AACAATCTAC TAATTCACAA GAATTAGAAT TGTAA
 
Protein sequence
MFDERHLQLT SAYDRASQHF IRAFIYPLGE FIYKSIEEAI DLKCRIEIGE ETYFLTPDED 
GGWKWSKGEQ EITNEEIEQI EGTLEYLLPR LLPGSHDSTP PNFPPPPDLP PVLPNPNIPP
SLPPSGELVD FLAIQIESNN TLEYQYLQSQ EEIFLTPPNW SNDYVINDVI EIQDVSITSS
TEIVDDSSIL DDANPDKDYE QSQVINSHEI ADEHLTVELI SNNTIPIKSE NLRPEHIDPQ
HWHELVVDSA IAPEIAQMNF QSLHFSQTNG SHEAWERLMI SENLPRTNTG RLSGEILKTY
SYLDLTDGWW CNAGVDPRTF EGLNPGETAH HKEWGCYKPN QPRPKRERDG QIIEGKFIKY
EHPPKTQLSI FLLDVPDKIA QNIYSLAGVN PSDSDRTSGF WYCVWKHNIS ITITEGAKKA
ASLLSQGHAA IGLPGISAGY RTPKNEWGQK MGDSYLAPEL AVFATKSREI KICFDYETKP
ETKLNIDRDI WKTGSLLQEL GCVVKVVTLL GPDKGVDDFL VSQGTEAFEK LSAMAISLEQ
WNKNKFDNLR CTLKLKDGTV RTISEPGDST LTTNVTLDES EQNIGVFKKN RAKSLINPSS
QIIHIKVTDA EIIDVEVISS RQNQPLEGAT LQNTSGTSWA KKENVTLYEP NFFRKRLEAS
ENKQIASAAY TLLKKYGVDT KDKQQQTIGK IYHADAFVIK NHGGDKYSIH RRHDHVELMT
FQADKWGHVG NIQLSYTQIK NALKTQPKKQ INILPIERQE FLLVADVIKA GKELPSVDCD
PRKIASTLSS LSPQGTHNIL ESFKEKEVLQ ILTQTITSFG QDDLTLGNYR ILFEQSTGTT
STLQLFKTEH NGITREAVRF EFERTEAGIT HQVKALAITE ADLEKLRLLA QKLHINYQAL
FGNPNNTRDI ELPLHPEIAL NLDSGQSPSK YRESDDQRQQ STVSQSTTPI LKATKPSQST
QQQNYSFNLD NVVLPLHPVL KQYWEQLELD GSGNKFVEQG HLEFQTKIQQ TGTLTVGEQR
ELYQQIQNQA WNQINRNGRT DIVLPALAVI VNDLRSLSLQ QSQPNISSDP ACDTPMPLHR
DIAAHWENLE TNNTWFSVAN QYNNPLRNKL EKTGKLTIGE QRELYQKILL QSQVEQHKKG
KTDIFLPPLS DIVQDLIDAR SQIIDHTYTP KVEVHSPQKS HTSQQSTNSQ ELEL