Gene Nwi_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_3133 
Symbol 
ID3676732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3388840 
End bp3389259 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID637714698 
ProductMerR family transcriptional regulator 
Protein accessionYP_319732 
Protein GI75677311 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.845727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCG ATTTCCTGGC CATTGGCGAG TTGGGGCGAA GGACGGACAC CAAGATCGAA 
ACAATCCGCT ACTATGAGCG AATTGGACTG CTTGCCGCGC CGGGCCGGAC GGCGGGCAAC
TACCGGGCCT ATGGTCCAGA GCACCTCAAT CGGCTGAGCT TCATCCGGCG CTCGCGAAAT
CTTGGGTTTT CGCTCGACCA AGTGCGCGCA TTGCTCGACT TGGCCGACCA GCACGATCGC
TCCTGCGACG CTGTCGATGC AATCGCCAAA GAGCACCGGG CCGAGGTTGA TCGAAAGATT
GCCGACTTGC GCACTCTGCG TCGTGAACTC GACAGCATGA TCGATCAGTG TCGCTGCGGC
ACGGTTGCCG ATTGCCGGAT CATCGAGGCG CTGTCGCCCA CAACCATAGT CGCGCCATAA
 
Protein sequence
MTGDFLAIGE LGRRTDTKIE TIRYYERIGL LAAPGRTAGN YRAYGPEHLN RLSFIRRSRN 
LGFSLDQVRA LLDLADQHDR SCDAVDAIAK EHRAEVDRKI ADLRTLRREL DSMIDQCRCG
TVADCRIIEA LSPTTIVAP