| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_3068 |
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| Symbol | |
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| ID | 3674532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 3332911 |
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| End bp | 3334080 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637714633 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_319668 |
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| Protein GI | 75677247 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.76584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.634993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAACG ACGCGCTTTC CATCGCTCGC GATCTCATCC GCTGCCCTTC GGTGACGCCG
GCGGACGCCG GTGCGCTCGG CGTGCTCGAG CCGCTGCTCA AGAACGCCGG CTTTGATGTT
CACCGGATCA CCTTCAGCGA GCCGGGCGTC GCCGACATCG ACAATCTCTA TGCCCGCATC
GGCTCCGGCC GCCCTCACAT CGCTTTCGCC GGTCATACCG ACGTCGTACC TCCAGGCGAC
GAAGCCGCGT GGACCCGTGG CGCGTTCTCG GGCGATGTGG TTGATGGTTT TCTCTATGGG
CGCGGCGCGG TGGATATGAA GGGCGGGGTC GCCTGCGGCG TCGCGGCCGC GCTGGACTAT
CTCGCGGCGC ATGGCGGCCG GCCGGGGAAA GACGGCAGCG GCTCGATTTC GTTCCTGATC
ACAGGCGACG AGGAGGACAT CGCCGTCAAC GGCACCGTCA AGCTGCTGCA ATGGGCCGCC
GCGCGCGGCG AGAAATTCGA TCACTGCGTG CTCGGCGAGC CCAGCAATGT CGAGGAACTC
GGCGACTGCA TCAAGATCGG CCGCCGCGGC TCACAGTCCG GCACGCTGTA TGTCGACGGC
GTGCAGGGTC ACGTCGCTTA CCCGCACCGC GCCTCGAATC CGATTCCGGA GATCGCCGCG
CTGATCACCG CGCTTGTGAG CGAGCCGCTG GATCAGGGCA GCTCTCAGTT CCAGCCTTCC
AATCTGGAAT TCACCTCGGT CGATGTCGGA AATCCGGCAG CCAATGTGAT TCCGGGACAG
GCGCGCGCGA GGTTCAACAT CCGCTTCAAC GATCATCACG ATCAGCAATC GCTCCGTGCG
CTGGTCGAGG CGCGTGTCGC GGGAGCCTCG GGCAATCGTG TCCGAACCCG CATCGTGTGG
GAGCCTTCGA ATGCCGACGT GTTCCTGACC GAGCCCGGCC CGTTCACCGA TCTCGTGGCC
GCGGCCGTTG AGGATGTCAC CGGCCGCAGG CCGGAGTTGA GCACCGGCGG CGGCACGTCG
GACGCGCGTT TCATCAAGGA CTATTGCCCG GTGATCGAGT TTGGTCTGGT CGGGCGGACC
ATGCACCAGA TCGACGAGCG CGTTCCGATC GCTGATCTCG AAAAGCTGAC GCGGGTCTAT
CGCGGCGTGC TGGACCGTTA CTTCGCATGA
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| Protein sequence | MGNDALSIAR DLIRCPSVTP ADAGALGVLE PLLKNAGFDV HRITFSEPGV ADIDNLYARI
GSGRPHIAFA GHTDVVPPGD EAAWTRGAFS GDVVDGFLYG RGAVDMKGGV ACGVAAALDY
LAAHGGRPGK DGSGSISFLI TGDEEDIAVN GTVKLLQWAA ARGEKFDHCV LGEPSNVEEL
GDCIKIGRRG SQSGTLYVDG VQGHVAYPHR ASNPIPEIAA LITALVSEPL DQGSSQFQPS
NLEFTSVDVG NPAANVIPGQ ARARFNIRFN DHHDQQSLRA LVEARVAGAS GNRVRTRIVW
EPSNADVFLT EPGPFTDLVA AAVEDVTGRR PELSTGGGTS DARFIKDYCP VIEFGLVGRT
MHQIDERVPI ADLEKLTRVY RGVLDRYFA
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