| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_3001 |
|---|
| Symbol | |
|---|
| ID | 3675028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 3247773 |
|---|
| End bp | 3248759 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637714567 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_319603 |
|---|
| Protein GI | 75677182 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.152083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACGG CCATTACGGA ATTGTTTGGC ATCGAGCATC CGATCATCCA GGGCGGCATG
CATTATGTTG GTTTCGCGGA GTTGGCCGCC GCCGTCTCCA ACGCGGGCGG GCTCGGAATC
ATCACCGGGT TGACCCAGAA GACGCCGGAG TTGCTGGCGA AGGAGATCGC GCGCTGCCAG
GACATGACAG GCAGGCCGTT CGGCGTGAAC CTGACGTTTC TGCCCGCCTT CACCGCGCCG
CCCTATCCTG AGTATATCCG CGCAATCGTG GAAAGCGGCG TCAGGATCGT TGAAACGGCG
GGCCGTAATC CGGAAGCCTA CATGGCGGCG CTCAAGGCCG CCGGCGTCAA GGTGATCCAC
AAATGCACCT CGGTGCGGCA CGCGCTGAAA GCGGAACAGA TCGGCTGTGA TGCGGTCAGC
GTCGACGGAT TCGAGTGCGG CGGTCATCCC GGCGAGGACG ACATCCCCAA CATGATCCTG
CTGCCGCGCG CGGCCGACGA ACTCAGGATT CCCTTCGTGG CGTCGGGCGG CATGGCGGAT
GCGCGCAGCC TGGTCGCCGC CCTGGCGCTC GGCGCCGAGG GCATGAACAT GGGCACCCGC
TTCATCGCGA CGAAGGAAGC GCCGGTGCAT GATAACGTGA AGCAGGCGCT GGTCGCGGCC
TCCGAGCGCG ATACCCGGCT GATCATGCGC GCGCTGCGCA ATACCGAGCG CGTGCTGAAC
AACCGCAAGG TCGAGAGGCT GATGGAGATC GAACGCGAGA AAGGCGACAG CCTAAGGATC
GACGATATCA TGGAGCAGGT CGCCGGCGTC TATCCGCGGG TCATGATCGA AGGCGACGTG
AATGCCGGCG CCTGGAGCTG CGGCATGACG GCGGGCTTGA TCCATGATGT GCCGAGCTGC
AAGGATCTGA TCGAGCGCAT CGTGAGCGGT GCGGAGCGCA TCATCCGCCA GCGCCTGACC
GGCCTGCTTG AGGGTAGGGC GGCGTAG
|
|---|
| Protein sequence | MKTAITELFG IEHPIIQGGM HYVGFAELAA AVSNAGGLGI ITGLTQKTPE LLAKEIARCQ
DMTGRPFGVN LTFLPAFTAP PYPEYIRAIV ESGVRIVETA GRNPEAYMAA LKAAGVKVIH
KCTSVRHALK AEQIGCDAVS VDGFECGGHP GEDDIPNMIL LPRAADELRI PFVASGGMAD
ARSLVAALAL GAEGMNMGTR FIATKEAPVH DNVKQALVAA SERDTRLIMR ALRNTERVLN
NRKVERLMEI EREKGDSLRI DDIMEQVAGV YPRVMIEGDV NAGAWSCGMT AGLIHDVPSC
KDLIERIVSG AERIIRQRLT GLLEGRAA
|
|---|
| |