| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2888 |
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| Symbol | |
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| ID | 3676844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 3119427 |
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| End bp | 3122336 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637714453 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_319490 |
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| Protein GI | 75677069 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00821454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTGCTG CAACTGAAAC TGTACCTGCT GCGCGTATCG TGCGTCCGTC CCTGTCTGCC
GCGGCCACGG CGCCGTCGAG CGAACCGGCC TGTCAAGTCA TCCGGCGCAA CGGCTCGGTG
TCGCCGTTCG ATTCCGCCAA GATCGCGGTC GCGCTCACCA AGGCGTTTCT GGCGGTCGAG
GGCAACAGCG CCGCCGCCTC GCGCCGGGTC CACGACATCG TCACCGGGTT GACCGATCAG
ATCGTCGCCA GCCTGACGCG ACGCTCCGAC GCCGGCCGCA CCTTCCACAT CGAGGACATT
CAGGATCAGG TCGAACTCGC GCTGATGCGG AGCGAGCATC ACAAGGTCGC GCGCGCCTAT
GTGCTCTATC GCGAGGAGCG CGCCCGCGAG CGCGCGAAGG CGCAGGAATC GAAGTCGAAG
AAGGGCGGCG CGGCGGCGGC GAAAGCGGCG CTGCGGATGA AGTCGGCGGA CGGATCGCTG
ATCGCTCTCG ACACCCCGCG CCTCACTGCC GTGGTGGAGG AGGCCTGCGC GGGGCTTGGA
GATGTTTCCG CCTCGGCCAT TCTGACGGAA ACCCATCGCA ACCTCTATGA CGGCATCAGC
GTGGATGAAC TGGCGCAGGC ACCGATCCTG GCCGCCCGCA CGCTGGTCGA GACCGATCCC
GATTACGCCA AGGTCAGCGC CCGGCTGCTG CTCGACAAGA TGCGCCGCGA GGCCTTGAGC
TTTGTCGCGG GGCGGCTTGA GCAGGCCACG CAGGCCGAGA TGGCGGAGCG CTATGCGGAC
TATTTCCTTA GCTATGTGCG GGCCGGCATC GACCATGAAC TGCTCGATCC GGAGATCGGC
CGCTTCGACC TCGACCGGCT CGCGGCGGCG CTGAAGCCCG AACGCGATCT GCGATTCGAC
TATCTCGGAC TCCAGACCCT CTATGACCGC TACTTCCTGC ACGTCCGAAG CGTGCGTTTC
GAGCTGCCGC AGGCGTTCTT CATGCGGGTC GCGTGCGGTC TGGCGCTGCG TGAGATCGAC
CGCGAGGAGA AGGCGATCGC GTTCTACGAC CTGCTGTCGT CGTTCGACTT CATGGCCTCG
ACGCCGACGC TATTCAACGC CGGCACGCTG CGCCCGCAGC TCTCGTCCTG CTTTCTCACG
ACCGTCGCCG ACGATCTCGA CGGCATCTTC AAGGCGATCA AGGACAACGC GCTGCTTTCC
AAATATGCCG GCGGGCTCGG CAACGACTGG ACGCGCGTGC GCGGGCTCGG CGCTCACATC
AAGGGCACCA ACGGCGAAAG CCAGGGCGTG GTGCCGTTCC TGAAGGTCGC GAACGACACC
GCGATCGCCG TCAACCAGGG CGGCAAGCGC AAGGGCGCGG TGTGCGCCTA TCTCGAAACC
TGGCACATCG ACATAGAGGA ATTTCTAGAC CTGCGAAAGA ACACCGGCGA CGACCGCCGC
CGCACCCATG ACATGAACAC GGCGAACTGG GTGCCTGACC TCTTCATGCA GCGTGTCGAG
GAGGATGGCA TGTGGACGCT GTTCTCCCCC GACGAGACGC CGGACCTGCA CGATCTCACC
GGCAAGGCTT TCGCCGGGCG CTACGCTTAC TATGAGGAGA AGGCGGCGCG CGGCGAACTG
CGGGTGACGA AGCAGGTCCG CGCCGTCGAC CTGTGGCGGC GGATGCTGAC CATGCTGTTC
GAGACCGGGC ATCCCTGGAT CACCTTCAAG GATCCCTGCA ACCTGCGCTC GCCACAGCAG
CATTGCGGCG TGGTGCATTC CTCGAACCTC TGCACCGAGA TCACGCTCAA CACCTCGAAC
ACGGAGGTCG CGGTCTGCAA CCTCGGCTCG GTTAATCTCG TCAACCACAT CAAGGACGGC
AAGCTCGACC ACGAGCACCT CGCGCGCACG GTCAGGATCG CGATGCGGAT GCTCGACAAC
GTGCTGGACG TGAATTTCTA CACCATTCCG GAGGCGCGGA CCTCGAACCT GCGGCACCGG
CCGGTCGGTC TCGGCATCAT GGGCTTTCAG GACGCGCTCA ACATCCTGCG CCTGCCCTAT
GCCTCGGATG AAGCCGTTTC CTTCGCCGAC GAGAGCATGG AGGCGATCGC CTATCACGCG
ATCTCCGGCT CGGTCGAACT CGCCGCCGAG CGCGGCCGCT ACCCCTCCTA TCAGGGCTCG
CTGTGGTCGA AGGGCGTCCT GCCGCTGGAT TCGCTTGAGC TTGTCGATGA GGCGCGCGGC
GCGGAGGTCG ACATCGACCG TTCCAGCCGT CTCGACTGGG ACTCGTTGCG CCAGCGCGTC
ATGACCATCG GGATGCGCAA TTCGAACTGC ATGGCGATCG CGCCGACCGC GACGATCTCC
AATATCTGCG GCGTGTCGCA GTCGATCGAG CCCGCCTATC AGAACCTCTA CGTCAAATCC
AACATGTCCG GCGACTTCAC GGTGGTGAAC GCGCACCTCG TGCGCGATCT CAAGGCGCGC
GGCCTGTGGG ACGAGGTGAT GATCTCGGAC CTCAAATATT TCGACGGCAG CGTCGGCGAG
ATCGACCGCG TTCCCGATGA CCTCAAGGCG CTCTACGCCA CCGCCTTCGA GATCGACTCG
GCCTGGCTGA TCGATGCGGC CGCGCGGCGG CAGAAGTGGA TCGACCAGGC GCAGTCGCTC
AATCTCTACA TCGCTAATCC GAGCGGCAAG AAGCTCGATG CGCTCTATCG CCACGCCTGG
AAGCGCGGCC TGAAGACGAC CTATTACCTT CGCTCGCGGT CGGCGACGCA TGTCGAAAAA
TCGACTCTCA AGGGTACGGA CGGCAAGCTC AACGCGGTCG CCGCGTCGGT ATCGGTCGCG
CCGTTGAATG GTCATGCCGC GGTCGCTTCC GCGAGCGAAG GATGGAAATC CTGCCGCGTC
GATGATCCGA CCTGCGAGGC GTGTCAGTAG
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| Protein sequence | MSAATETVPA ARIVRPSLSA AATAPSSEPA CQVIRRNGSV SPFDSAKIAV ALTKAFLAVE
GNSAAASRRV HDIVTGLTDQ IVASLTRRSD AGRTFHIEDI QDQVELALMR SEHHKVARAY
VLYREERARE RAKAQESKSK KGGAAAAKAA LRMKSADGSL IALDTPRLTA VVEEACAGLG
DVSASAILTE THRNLYDGIS VDELAQAPIL AARTLVETDP DYAKVSARLL LDKMRREALS
FVAGRLEQAT QAEMAERYAD YFLSYVRAGI DHELLDPEIG RFDLDRLAAA LKPERDLRFD
YLGLQTLYDR YFLHVRSVRF ELPQAFFMRV ACGLALREID REEKAIAFYD LLSSFDFMAS
TPTLFNAGTL RPQLSSCFLT TVADDLDGIF KAIKDNALLS KYAGGLGNDW TRVRGLGAHI
KGTNGESQGV VPFLKVANDT AIAVNQGGKR KGAVCAYLET WHIDIEEFLD LRKNTGDDRR
RTHDMNTANW VPDLFMQRVE EDGMWTLFSP DETPDLHDLT GKAFAGRYAY YEEKAARGEL
RVTKQVRAVD LWRRMLTMLF ETGHPWITFK DPCNLRSPQQ HCGVVHSSNL CTEITLNTSN
TEVAVCNLGS VNLVNHIKDG KLDHEHLART VRIAMRMLDN VLDVNFYTIP EARTSNLRHR
PVGLGIMGFQ DALNILRLPY ASDEAVSFAD ESMEAIAYHA ISGSVELAAE RGRYPSYQGS
LWSKGVLPLD SLELVDEARG AEVDIDRSSR LDWDSLRQRV MTIGMRNSNC MAIAPTATIS
NICGVSQSIE PAYQNLYVKS NMSGDFTVVN AHLVRDLKAR GLWDEVMISD LKYFDGSVGE
IDRVPDDLKA LYATAFEIDS AWLIDAAARR QKWIDQAQSL NLYIANPSGK KLDALYRHAW
KRGLKTTYYL RSRSATHVEK STLKGTDGKL NAVAASVSVA PLNGHAAVAS ASEGWKSCRV
DDPTCEACQ
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