Gene Nwi_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2853 
Symbol 
ID3675600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp3086450 
End bp3087817 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content64% 
IMG OID637714418 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_319455 
Protein GI75677034 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGAC AGACCTCTCC CCGTGACCTG CCGCGGGCCC AGTTCCTCGC CGAGCGGGCC 
CTTACGACGC TGGAGCGCTT CCTGCATGTC GAGGCCGTCA GCGGCATCGT GCTGCTGGTC
GCGGCTGCTG TTGCACTGAT CTGGGCCAAC TCCCCTTTCG CCCAAAGCTA TCACGACCTG
TGGCATCTGC CGCTTTCGAT CGGGCTCGGC ACTTTCGTCT ATGCGCAGTC CCTGCATTTC
TGGGTCAACG ATGCGCTGAT GACAGTGTTC TTCCTGGTCG TCGGCATGGA AATCCGGCGC
GAGATCCATG AAGGGGCACT GAGCAAACTC GACCAGGCGA TCCTGCCGGT GGCGGCAGCC
GCCGGAGGGG TCATCGTTCC CGCACTGATC TACCTTGTGC TGAACACCGA CATGGTGCGC
GCGCACGGCT GGGCGGTGCC GACGGCGACC GACATCGCTT TCGCGGTGGG CGTGCTCGCC
CTGCTGGGCC GCTCGATCCC CGGCAACTTG CGCGTCTTTC TGCTCGCACT CGCGATCATC
GACGACGTCG TTGCTGTTTT GATCATAGCC TTCTTCTACT CTGGCGGGCT CGATCCCAGC
GGTTTTGCGA TTGCCGCCCT CGGCGTCGTG ATGGTGGTGG GGCTTCAGCG GATCGGTGTC
GGCTCGGCCT ATGCCTACGT CCTTCCCGGC GCCGTGATCT GGGTTGGCCT GCTGGTGACC
GGGGCCCACC CGACTCTCGC CGGCGTCGTA CTCGGATTGA TGACGCCGGT GATGTCCATT
CCGATGCGCG AGCAGCCTAT AGACGTGTTG TCCCGTATTT CCGAGGAGCT GCGAAGCCAC
GACGCCGTGT CGACGAAAGA TGCGCGTCGT CTGGCTCACC CCCGGCGGCA GTTGCGCCTC
GCCAATCGGG AGATGCTGCC GCCAGTGGTG CGTGTACAGA CAGCGTTGCA TCCCTGGGTC
GCCTACGGCG TCATGCCTCT CTTTGCGCTG GCGAATGCGG GCGTGAGTGT CGGTGGCGTC
AATCTGTTCG CAGGAGAAGC GCATCTCGCC ATGCTCGGCG TCGGGCTTGC TCTCGTTGTA
GGCAAGCCGC TCGGCGTAGT CGGCGCGACA TGGTTCATGG TGCGGATGGG CTGGTGCCGG
TTGCCGCCGG GCGTGTCATG GGGCGGCATT TTGTTGATCG GTCTGCTAGC CGGTATCGGC
TTTACCATGT CCATTTTCAT CGCCATTCTT GCTTTTGCCG ATGAGAATCT GCTGGCCGCG
GCAAAGCTCG GCGTGCTGCT AGGCTCTTCG GTGGCCGCGC TGCTCGGGCT TGGCTGGGGC
GCATTGTACG TCCGCAGACT CAGAGCGCGG ACGGGCGCTC ACGATTGA
 
Protein sequence
MDRQTSPRDL PRAQFLAERA LTTLERFLHV EAVSGIVLLV AAAVALIWAN SPFAQSYHDL 
WHLPLSIGLG TFVYAQSLHF WVNDALMTVF FLVVGMEIRR EIHEGALSKL DQAILPVAAA
AGGVIVPALI YLVLNTDMVR AHGWAVPTAT DIAFAVGVLA LLGRSIPGNL RVFLLALAII
DDVVAVLIIA FFYSGGLDPS GFAIAALGVV MVVGLQRIGV GSAYAYVLPG AVIWVGLLVT
GAHPTLAGVV LGLMTPVMSI PMREQPIDVL SRISEELRSH DAVSTKDARR LAHPRRQLRL
ANREMLPPVV RVQTALHPWV AYGVMPLFAL ANAGVSVGGV NLFAGEAHLA MLGVGLALVV
GKPLGVVGAT WFMVRMGWCR LPPGVSWGGI LLIGLLAGIG FTMSIFIAIL AFADENLLAA
AKLGVLLGSS VAALLGLGWG ALYVRRLRAR TGAHD