| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2846 |
|---|
| Symbol | |
|---|
| ID | 3675593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 3077297 |
|---|
| End bp | 3079423 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637714411 |
|---|
| Product | peptidase C14, caspase catalytic subunit p20 |
|---|
| Protein accession | YP_319448 |
|---|
| Protein GI | 75677027 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGT CCTCCGGCGC GGCATGGGCT GACAAGCGCA TCGCGCTGGT GGTCGGCAAT
TCCAGCTATC AAACGGTGCC GCAGCTTCCA AACCCCGCAC GCGACGCCAA GGCCGTCGGC
CAGATGTTCG AGGACGCCGG TTTCGATTCG GTGGAGGTGC TGCTCGATCT CGGCAATCTC
GATTTCAAGC GCGCCATCCG CAAGTTCGAA ACCGACGCCG ATCAGGCCGA CATCGCGGTG
ATCTATTATG CCGGCCATGG CATCGAGGTG AACGGCAACA ATTTCCTGAT TCCGGTCGAC
GCACGGCTCT CCAGCGACCG CGACGCCGAG GACGAAGCGA TCCGGCTGGA GCGCATGGTG
CTGTCGGCCG ACGGCGCGAA AAAATTGCGT GTCATTATCC TTGACGCCTG CCGTGACAAT
CCGTTCACGG TGAAGATGCG CCGCGAGCGT CGCGCCGCCC TGCGCGCGAT TTCGTCCGGC
CTCGGAAAGG TCGAGCCGAC CTCGACTGAT ACCCTGATCG CCTACGCCGC GAAGGCAGGA
TCGACGGCCG ATGACGGCGA GGGCAGGCAC AGCCCGTTCA CCACGGCGCT GCTCAAGAAC
CTTACCGTGC CCGGCCTCGA TATCCGCCTT GCCTTCGGCC GGGTGCGCGA CGAGGTGATG
AAGCTGACGG GCGCCCGGCA GGAGCCGTTC GTTTATGGGT CGCTCGGCGG CGGCAACATC
TCGCTGGTTC CGCCGCCGGT GGTCGAGAAG GAGCCGGAGG CTGCCGACGT CAAGGGTGAC
TTCGAACTGG TCGCCAAGAT CAATTCGCCG CGCGCCTGGG AGGTGTTCAT CAGCACCTAC
AAGACCGGCT TCTATGCCGA TCTGGCGCGG GCGCAGCTTG CCAGCCTGAC CAGCAAGACC
GCAACCGATA TCGTCCGTGA TGTCGGCAAC GTCACCGTGG CGGCGCTGCC GCAGGACACG
CCCGCGCCGG TGAACGAGCC ATCGTCCCGC GAGCGACTCG AGTTCGACCG GCTGAAGGAT
TCAACCGACC AGGCCGCGCT GAAGCGATTT ATCAAGCGCT ATCCGGATTC GCCGCTGGCG
CTGCAGGTGC AGCATCGCCT GGAGGTGTTG CAAAACGCCG CGGCCGAGCG CGAGGAAAAG
CAACGTGCGG AGCGCGAAGC CGCGCGGCTC GCCGCCGAGC AGGCGCGCAT CGAAGCCGAG
CGCAGGAAAG CGGAGCTGGC GGCCGCGAGG AAGCGCGAGG AAGACGAGCG CCGCGCCAAG
GCCGAGGAAG CGGCGCAGCA GGCCCGCGCA GCCGAGGCCG AGCGCAAGGC GGCCGAGGCC
AAACGCAAGG CCGAGGAGGC CCAGAGAAAA GCTGAAGAAC GCGCAGCCGC CAAGACGGCG
GCCGAAGCCG CGCGTCAGAA GGCCGAGAGC GAGCGCGCGG CGCGTCAGGC CGAGCTGGAA
CGACGGAAGG CGGAAGAAGA GCGCCGCAAG GCCGAGCTTG CGAAACAGAA GGAAGAGGCC
TGCAAGGCCG AGGAAGCCCG ATTCAAGGAA CTCATCGCCA ACGGCGGCGA GGGTAAAGGG
CTCGACAACG TCAAGGCGTT CGCCCGGGAG GCAACCTGTG CCCGCCTGCA GCCACAGGTC
GCGAGCACGA TCAAGACGTT CGAGGACGAG ATTGCCAGGC GCCTGGTCAT GACAGCGCAG
GTTGAACTCG GTCGCATCGG CTGCTTCGCC GGCGACGCCG ACGGCCAACT CGGTCCCGCC
ACCAGGACGG CGCTCAACCG CTACCAGGCC GCCAAGAACC CCTCGGGCAA GGCCGGCTCG
GATAAACGCC GCAACAACGG CGACCTCCCC CTCACCGATG ACGTGGTGAA GGAGCTCGGC
CAGCAGAGCG GCCGGGTCTG TCCGCTCGCA TGCAAGACCG GCGAGGCGCT CAAGGACGAT
ACATGCGTCG CCGTGACCAA GCCGCAGCCG CCGGCCACCG TGCAACACAA GCGCGACGAG
AAGGCGACGG CGAGCAAGCC GGCCCGCCGT CCCGAGCGCA CCCAGACCAG CCGTCAGCGC
GAGCCCGCGC CCCGCGCCCG GCAGGAAGCA TCGCGCCCAT CTTCATCGTA TCGCGCGGCC
CCCGCCATGA TCGGCGTTGG CTTCTGA
|
|---|
| Protein sequence | MALSSGAAWA DKRIALVVGN SSYQTVPQLP NPARDAKAVG QMFEDAGFDS VEVLLDLGNL
DFKRAIRKFE TDADQADIAV IYYAGHGIEV NGNNFLIPVD ARLSSDRDAE DEAIRLERMV
LSADGAKKLR VIILDACRDN PFTVKMRRER RAALRAISSG LGKVEPTSTD TLIAYAAKAG
STADDGEGRH SPFTTALLKN LTVPGLDIRL AFGRVRDEVM KLTGARQEPF VYGSLGGGNI
SLVPPPVVEK EPEAADVKGD FELVAKINSP RAWEVFISTY KTGFYADLAR AQLASLTSKT
ATDIVRDVGN VTVAALPQDT PAPVNEPSSR ERLEFDRLKD STDQAALKRF IKRYPDSPLA
LQVQHRLEVL QNAAAEREEK QRAEREAARL AAEQARIEAE RRKAELAAAR KREEDERRAK
AEEAAQQARA AEAERKAAEA KRKAEEAQRK AEERAAAKTA AEAARQKAES ERAARQAELE
RRKAEEERRK AELAKQKEEA CKAEEARFKE LIANGGEGKG LDNVKAFARE ATCARLQPQV
ASTIKTFEDE IARRLVMTAQ VELGRIGCFA GDADGQLGPA TRTALNRYQA AKNPSGKAGS
DKRRNNGDLP LTDDVVKELG QQSGRVCPLA CKTGEALKDD TCVAVTKPQP PATVQHKRDE
KATASKPARR PERTQTSRQR EPAPRARQEA SRPSSSYRAA PAMIGVGF
|
|---|
| |