| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2751 |
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| Symbol | |
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| ID | 3675090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 2989347 |
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| End bp | 2992229 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637714318 |
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| Product | multi-sensor diguanylate cyclase/phophodiesterase |
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| Protein accession | YP_319356 |
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| Protein GI | 75676935 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.198014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0768897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGC ATCTGGTCAG GCGGCTTGCG TGGCTTACGC TGGCCCTCAT GATTTTCGTC
GCGGCATCGC CGGCGCGCGC AGTCGACGCC GTCAGCGTCC GGAGCGACGC GCCCGCCATC
GATCTCACCG CCATCCTCGA TCATCAGCAC AGCGATTCCG ACCGCATTCA GGTCTCGACC
GCGCCCGGCA CCGACGGCAT TGTTCGCCGC GTCGAGGTGC GCGCGCGGGA AGGCGGCCAG
AACTGGGTGG TATTCGCGCT CGCCAACAAC ACCGACGATC AACTCGACCG CCTGATCGTC
GCACCGCATT ACCGCCTGGT GTCGTCGGGA CTGCTGTGGC CGGATCTCGG GCAATCGCGC
ATCGCCACCA TCACGCCGTC GACCGGCGAT CGTCCGGAGC GGCAGGAGAG CGCCACCGCC
GATGTCTTCC AGATCACGCT CGATCCCGGC GCCGTCATCA CTTTCGTCAT GGAACTGCGC
ACCGACAGGC TGCCGCAGCT TTATCTCTGG GAGCCCGACG CCTACAAGGA CAAGGTCAAT
TCCTTCACCC TGTATCAGGG AATCGTCATC GGCATCTCCG GGCTGCTGGC GCTGGTGCTG
ACCATCCTGT TCGTGGTCAA GGGAAGCATC ATGTTTCCCG CCGCCGCGGC GCTTGCCTGG
GCGGTACTAG TCTACATCGG CGTCGATTTC GGCTTCTGGG GCAAGGTGCT GGACATGCCG
GCCGGCGCTG AACGAATCTG GCGCGCCTCG GGCGAGGCGA TTCTCGCGGC GACGCTGCTC
GTATTCCTGT TCGCCTACCT CAATCTCAAT CGCTGGCACG TGCGCTATTC GCACATCACT
CTCGGCTGGC TTTTCTTTCT CGGCTCGCTG GTGGCGCTTG CCCTGTTCGA TCCGGCGGTC
GCCTCCGGCA TCGCCCGGAT ATCGCTCGCG CTGATCGCGG TATTCGGCTT CGGGCTGATC
GTCTATCTCG CGGTTCACGG CTTCGATCGC GCCGTCCTGC TGATCCCGAC CTGGTTCCTG
CTGGTGGTGT GGGTCGCCGC AGCCGGAATG GCGATCGAAG GCAAGGTCGT CAACGACATC
GTGGGCCCCG CTTTGCTCGG CGGCCTCGTG CTGATCGTGA TGCTGATCGG GTTCACGGTG
ATGCAGCATG CCTTCGCCGG TGGAGGCGGC GCTTCGGGCG TCGTATCCGA CATCGAGCGC
CGCGCGCTCG CATTGACCGG CGCGGGCGAT CTGGTCTGGG ACTGGGACGT CTCCGCCGAC
AAGGTCTTCA CCAGTCTCGA GACCGAAAGC CTGCTCGGCC TCAAACGCGG CACGCTCGAA
GGGCCGGCGG CAGGCTGGCT GGAGGTGCTG CATCCGCTCG ATCAGGACCG GTTCCGCGCG
GCGCTGGACA GCGTGCTCGA ACAGCGCCGG GGCCGGCTGG TGCAGGACTT CCGGCTGCGC
GCGTCCGACG GCCACTTCAT GTGGTTCGCC CTGAAGGCGC GCCCGGTGGT GGGGTCCGAC
GGCGAGGTGT CGCGCGTGGT CGGAACTCTC GCCGATGTCA CCGAAACGAG GAAGGCCGAG
GAGCGAATGC TGCACGATTC GGTGCACGAC AACCTGACCG GCCTTCCCAA CCGTAAACTC
TTCATTGACC GTCTCAACGC GGTCGCGACG CTGGCCAAGA CCATGCCGGG CCTGAGGCCG
ACCCTGATGG TGATCGATTT CGACCGCTTC AAGCAGGTCA ACGATTCTGT TGGCGTCGCC
GTGGGAGATT CGATCCTGCT GACCCTGGCG CGACGGCTTA CGCGTATCCT TAAGGCCCAG
GATACGCTGG CGCGGCTTTC CGGCGATCAG TTCGGCCTCA TCCTGATGTC GGAGCAGGAT
CCGCCTCGCA TCACCGCGTT CGCCGAAACC ATCCGCAAGA CCATCCGCGC CCCGATCGCC
TTCAATGACC GTGAGATCTT CCTGACCGCG TCGATCGGCC TCGCGCTGAG CGACCCTCAG
ACGCAGTTGT CGGACCAGAT GATCAAGGAC GCCGAACTGG CGATGTACCA TTCCAAGCGG
ATCGGCGGCG ATCGGATCGA TGTCTACAAA CCCGCGATGC GCGCCCGGAA GAACGACCGG
CTATCGCTCG AGGCGGAGTT GCGGCGCGCC ATCGAGCGGC AGGAGATCAC CGTCCTCTAC
CAGCCTATCG TCCGGCTGCA GGACCGCTCG ATCGCGGGCT TTGAAGCGCT GGCGCGATGG
GACCACCCCA AGCTCGGACG GATGGCGCCC GACGAATTCA TCACCATCGC CGAGGAAGCC
GGCCTGATCG TCGATCTCGG GACCTTCGTG ATGGACCAGA CCGCGCGCCA GCTTGCCGTC
TGGCAGCGCG CCATGCGGTC GCAGCCCCCG ATTTTCGCCA GCGTCAACGT CTCCTCGCGC
CAGTTGCTGC GGCACGATCT GATCCACGAC ATCCGCTCGG TGCTGTCGCG CTCATCCATC
GCACGCGGCA CCCTGAAGCT TGAACTGACC GAATCGCTCG TCATGGAAAA TCCCGAACAT
GCAGCGCAGA TGTTGCAACG GATTCGCGAA CTCGGCGTCG GGCTCTCGCT TGACGATTTC
GGCACCGGCT ATTCCTCGCT GTCATACCTG CAGCGTTTCC CGCTCGACAC CATCAAGATC
GACCAGTCGT TCGTGCGCAC CTCGACCCGC GGCACGCGGC CGGTCATTCT CAAGTCGATC
ATCGCGCTGG CGCACGATCT CGGCATGGAT GTCGTCGCCG AGGGCGCCGA AACCGACTCC
GATGCAGTGG AACTCTATCA GATGGGCTGC GAATACGCCC AGGGCTTTGC TTTCGGCGAG
CCGATGGACG TCGATGCGAC GATGCGGCTC CTGGCCCAGG AGCGGCTCGA GACGGCAAGC
TGA
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| Protein sequence | MTLHLVRRLA WLTLALMIFV AASPARAVDA VSVRSDAPAI DLTAILDHQH SDSDRIQVST
APGTDGIVRR VEVRAREGGQ NWVVFALANN TDDQLDRLIV APHYRLVSSG LLWPDLGQSR
IATITPSTGD RPERQESATA DVFQITLDPG AVITFVMELR TDRLPQLYLW EPDAYKDKVN
SFTLYQGIVI GISGLLALVL TILFVVKGSI MFPAAAALAW AVLVYIGVDF GFWGKVLDMP
AGAERIWRAS GEAILAATLL VFLFAYLNLN RWHVRYSHIT LGWLFFLGSL VALALFDPAV
ASGIARISLA LIAVFGFGLI VYLAVHGFDR AVLLIPTWFL LVVWVAAAGM AIEGKVVNDI
VGPALLGGLV LIVMLIGFTV MQHAFAGGGG ASGVVSDIER RALALTGAGD LVWDWDVSAD
KVFTSLETES LLGLKRGTLE GPAAGWLEVL HPLDQDRFRA ALDSVLEQRR GRLVQDFRLR
ASDGHFMWFA LKARPVVGSD GEVSRVVGTL ADVTETRKAE ERMLHDSVHD NLTGLPNRKL
FIDRLNAVAT LAKTMPGLRP TLMVIDFDRF KQVNDSVGVA VGDSILLTLA RRLTRILKAQ
DTLARLSGDQ FGLILMSEQD PPRITAFAET IRKTIRAPIA FNDREIFLTA SIGLALSDPQ
TQLSDQMIKD AELAMYHSKR IGGDRIDVYK PAMRARKNDR LSLEAELRRA IERQEITVLY
QPIVRLQDRS IAGFEALARW DHPKLGRMAP DEFITIAEEA GLIVDLGTFV MDQTARQLAV
WQRAMRSQPP IFASVNVSSR QLLRHDLIHD IRSVLSRSSI ARGTLKLELT ESLVMENPEH
AAQMLQRIRE LGVGLSLDDF GTGYSSLSYL QRFPLDTIKI DQSFVRTSTR GTRPVILKSI
IALAHDLGMD VVAEGAETDS DAVELYQMGC EYAQGFAFGE PMDVDATMRL LAQERLETAS
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