Gene Nwi_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2746 
Symbol 
ID3676340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2984357 
End bp2986240 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content68% 
IMG OID637714313 
ProductABC transporter, ATP-binding/permease protein 
Protein accessionYP_319351 
Protein GI75676930 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID[TIGR02204] ABC transporter, permease/ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0546982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGG TAGAAGTGCG TGAGAATACG TCGAAGGCGC CGGCCGTTGC GCTGCCGCCC 
GGTAGCTCCC CGAAGGCCGG AACCGGAGCG TCGGAGCCTG CCGCGCCGGA TCAGGCCGCG
CCGTCCGCCA AGGATGCCCG CCGCCTCCGG CTGCGCCCGC TGCTGGCGCT CACGCCATAT
ATCCTCCGCT ATCGCGGCCG GGCGCTGCTT GCGCTTGTCG CGCTGATCGT CGCCGCCCTG
ACGACGCTTG TCGTGCCGCT CGCGGTGCGC AGGATCATCG ACTTTGGCTT CACGGCCGAG
GGCGTCGCGA TGATCAACAG CTACTTTACG ATGATGATCG GTGTCGTCGC CGTCCTCGCC
GGCGCCAGCG CGGCGCGTTA TTTTCTGGTG ACCACCACCG GCGAGCGCAT CGTCGCCGAC
CTGCGGCGCG ACGTGTTCGC CCACCTGATC TCGCTGTCGC CGGTGTTTTT CGACACCGCC
CGCAGCGGCG AGCTGATCTC GCGGCTGACC GCCGATACGA CCCAGATCAA GTCCGCGGTC
GGTTCTTCGA TATCGGTCGC GCTGCGCAAT GTCGTGCTGT TCATCGGCGC GGCTTCGATG
ATGGTCATCA CCAGTCCGCG CCTGTCCGGA CTGGTGCTGG CGGCGATCCC GTTGATCATT
GTGCCGCTGG TCGCGTTCGG ACGCTGGGTC CGCCGCCTGT CGCGGAGCGC GCAGGACAAC
CTCGCGGACG CCACCGCCTA TGCCTCCGAA CTGGTTGGCG GGATCAGGAC GGTGCAGGCC
TACACCAATG AACGGCTTGC CGATGCGCGT TTCGGTGGTG AAGTCGAACA TGCCTATCTG
GCGGCGCGCA ATTCGGCGCG CGCCCGCGCC GTGCTGACCG CGATCATCAT CTTCATCGTT
TTCACCAGCG TGGTCCTGAT CCTCTGGATC GGCTCTCGCG ACGTGCTCGA AGGCGACATG
ACGCCGGGCC GGCTCGGCCA GTTCGTGCTG TATGCCGCGT TCGCCGCGAC CGGTCTCGGC
CAGCTCAGCG AGGTCTGGGG CGAGGTTGCC GCCGCCTCCG GTGCGGCCGA GCGCCTGTTC
GAGCTTCTTC GCGTCAAGCC GGTGATCGCG GCGCCGCCGA CGCCGCGCGC GCTGCCGGCG
CCGGCGCGCG GCGATGTCAC GCTCGACAAT GTAAGCTTCG CCTATCCCTC GCGCCCGGAA
GTCAAGGTAT TGGACGGCGT CTCGCTGGCG GTGAAGGCGG GCGAGAAGGT CGCCATCGTC
GGCCCGTCCG GCGCGGGAAA AAGTACGATA TTTCATCTGC TGCTGCGGTT CTACGATCCT
GTCTCGGGCA CCATCTCCTT CGACGGCGTG CCGTTGCGCA CCGCCGATCC GCGCGAGGTT
CGCGCGCGGA TAGCGCTGGT GCCCCAGGAG TCGGTGGTCT TCGCCGCGTC CGCCCGCGAG
AATATCCGTT TCGGCAGGCC GGATGCGTCC GACGCCGAGG TTGAACGCGC CGCCGAACTG
GCTCATGCCA CCGAATTCAT CCGCCGCTTG CCCGGCGGCT TCGAGGCGCT GCTCGGCGAG
CGCGGCGTGA CGCTGTCCGG CGGACAGCGT CAGCGCATCG CCATCGCCCG CGCGATCCTG
CGCGACGCGC CTCTGTTGCT GCTGGATGAA GCGACGTCGT CGCTTGACGC CGAATCCGAG
ACCCTGGTGC AGACCGCGCT GGAAGAACTG ATGCGCCATC GCACGACGCT GGTGATCGCG
CATCGTCTCG CGACGGTCCT TTCCTGCGAC CGCATCATGG TCATGGAGCG GGGACGGATC
GTGGAACAGG GGACGCACGC CTCGCTGGTG GCGGCGAATG GACTATATGC CCGCCTCGCG
CGGCTGCAGT TCGAGGGGGC GTGA
 
Protein sequence
MSSVEVRENT SKAPAVALPP GSSPKAGTGA SEPAAPDQAA PSAKDARRLR LRPLLALTPY 
ILRYRGRALL ALVALIVAAL TTLVVPLAVR RIIDFGFTAE GVAMINSYFT MMIGVVAVLA
GASAARYFLV TTTGERIVAD LRRDVFAHLI SLSPVFFDTA RSGELISRLT ADTTQIKSAV
GSSISVALRN VVLFIGAASM MVITSPRLSG LVLAAIPLII VPLVAFGRWV RRLSRSAQDN
LADATAYASE LVGGIRTVQA YTNERLADAR FGGEVEHAYL AARNSARARA VLTAIIIFIV
FTSVVLILWI GSRDVLEGDM TPGRLGQFVL YAAFAATGLG QLSEVWGEVA AASGAAERLF
ELLRVKPVIA APPTPRALPA PARGDVTLDN VSFAYPSRPE VKVLDGVSLA VKAGEKVAIV
GPSGAGKSTI FHLLLRFYDP VSGTISFDGV PLRTADPREV RARIALVPQE SVVFAASARE
NIRFGRPDAS DAEVERAAEL AHATEFIRRL PGGFEALLGE RGVTLSGGQR QRIAIARAIL
RDAPLLLLDE ATSSLDAESE TLVQTALEEL MRHRTTLVIA HRLATVLSCD RIMVMERGRI
VEQGTHASLV AANGLYARLA RLQFEGA