| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2742 |
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| Symbol | |
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| ID | 3676336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2979841 |
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| End bp | 2981046 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637714309 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_319347 |
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| Protein GI | 75676926 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.285178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGAT TCAATATACG ACTGGCGTTT CTGGCTATCG TGATAGCCGG TTCGTCGCCG
CTTCTTGGCG GCTGCGATGA GCCGACAACG GCGGATGCGT CCGCTGGAAC TGTCATTCCC
GAGGTCAGCG TCATCACGGT GGTTCCGAAA CCGCACGCGA TCGTTCGCGA ACTGCCGGGA
CGCATCTCGC CGTTGCGGGT TGCGGAGGTG CGCCCGCGGG TTTCCGGCAT CATCACCAAG
CGCCTGTTCC AGCAAGGCAG CGAAGTGAAG GCCGGCGACC CGCTGTATCA GATCGATCCG
GAGCCGTTTG CGGTTGAAGT GCAGGCCGCG GAAGCGGCGC TCGCGAAAGC CAATGCCGTC
CTCGAACAGG CATCGCACCA TGCGAGACGT ATCGAGAAAC TGACCGCGCG GCATGCCACG
TCCGAGGCGG AGAACGAGAA GGCCATCGCC AACATGCGCC AGGCGGCGGC TGATGTCGCC
GCCCGCAAGG CGGATCTGGC GCGGGCGCGG CTCCATCTTG ATTACACCAC CATTCGCGCG
CCGATCGACG GCGTGGTCGG CGCCGCTCAG GTGACCGAGG GCGCGCTCGT CGTGCAGAAC
GATGCGGCGA GCCTCGCGAC GGTGCAGCAG CTCGATACGA TTTATGCCGA CTTCACCCAG
TCGGTGACGG AGCTTAACAA ACTTCGCCAT GCGTTCGAGT CTGGCGATCT GGAGCGCATC
GCACCGGGCG CCGCCAAGGT CCGCCTCCTG CTCAACGATG ATAAGCTTTA CCCGTTGCCC
GGAAAGTTCC TGTTTTCCGA GGCGAAGGTC GATTCCTCGA CCGGACAGGT GACGCTGCGC
GGCGAATTTG CCAATCCGAA GCGCGAGTTG CTGCCGGGCA TGTACATTCG CGTGCTGTTG
GAGCAGGGCG TCGACAGCGA TGCGATCGCC GTTCCGCAGC AGGCGGTGCA ACGCGACTCC
AGCGGCGGCA GCGAGGTCTT TGTCGTTCGG GACGACGATC GCGTTATCGT GCGTCCGATC
CGGACCGACG CGGTCCAGCA CGGCTATTCG ATGGTCAGCG ATGGGCTGAA TGCGGGCGAC
CGCGTCGTGG TCGAGGGCTT CCAGAAGTTC ACGGCGGGCG ACAAGGTTCG CGTCGTGACG
TGGGAAGCCG ATGCTTCGCC GAAGACGGGA GCGGTGCCGG GCGAAACAGC GTCCGCCCGG
CAGTAA
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| Protein sequence | MPRFNIRLAF LAIVIAGSSP LLGGCDEPTT ADASAGTVIP EVSVITVVPK PHAIVRELPG
RISPLRVAEV RPRVSGIITK RLFQQGSEVK AGDPLYQIDP EPFAVEVQAA EAALAKANAV
LEQASHHARR IEKLTARHAT SEAENEKAIA NMRQAAADVA ARKADLARAR LHLDYTTIRA
PIDGVVGAAQ VTEGALVVQN DAASLATVQQ LDTIYADFTQ SVTELNKLRH AFESGDLERI
APGAAKVRLL LNDDKLYPLP GKFLFSEAKV DSSTGQVTLR GEFANPKREL LPGMYIRVLL
EQGVDSDAIA VPQQAVQRDS SGGSEVFVVR DDDRVIVRPI RTDAVQHGYS MVSDGLNAGD
RVVVEGFQKF TAGDKVRVVT WEADASPKTG AVPGETASAR Q
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