| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2716 |
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| Symbol | |
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| ID | 3674605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2950321 |
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| End bp | 2952657 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637714283 |
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| Product | diguanylate cyclase/phophodiesterase |
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| Protein accession | YP_319321 |
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| Protein GI | 75676900 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC AGCCGATGCA ATTGGTCGAC CACCATCGCG ATACCGATAC GATGTCGCCA
GCGATATATG CGGCGCTCGT GGGGTCGCTC TTCCAGAACC CCGCGCCGAT GTTCGCTGGC
GCAGCCTGCG CTGCGATTGC CGCGGTCATG ACCGCATTGA AAACCGGCAA CCATCTGTTG
TGGCCCTGCG CGTTGCTTCT GGTTCTGATT GGCCTGCTCC GCAGTTTCGA CATGGCGAAA
TACAAGAATC GCCGTTCGGA TCTGACCGTA AGCGAAGCTG GGCGGTGGGA GGCTCGCTAT
CAGATCGGAG CGGTGCTCTA CGCAACCGCC CTTGGCGCCT GGTGCGCCAT CGCGCTTTTG
ATGACCGACG ACGCCGTCGC GCACATGATC TGCATTTCGG TCACCACGGG ATATGTGGCG
GCCGGCGCCG GCCGGGCCTA CGGGCTGCCA TGGATTTTCC ACTTGCAGAT TCTGCTGACC
TGCGGGCCGA TGGCCGGGGC GATGGCGCTG CGAGGCGACC CTTATTACTT CGGGATGGCG
CTTCTCACCG TGCTGTACTT CCTTGGTCTG GAGAGGATCA CGACCAGGTT GCAGCAGATT
TTTCTCCGCG CCTTGATCGC GCGCGAACGC GAAGCCGCGC TCGCCGGCCA GTTCGACACC
GCGCTGAACA ACATGCCTCA TGGCCTGTGC ATGTTCGGCG CTGACGGCCG GCTGGGCGTG
ATGAATTATC GTTTCAACGA AATGATGCAT CTGGCCGACG ATTTCGTGCA TCGCGGCGTC
GGCGCGGTGG ATGTGATTGC CGCATGCGTG ACCGCCGGAA CGATGTCACC CGAAAACGGG
AGGGCGATTG TCTCGGAGAT CGAGAATTCA CAGGCCGGCG CCATCGTGAC CGCCGATGTG
GATCTTGAAC GCGGCCGGGC GCTGTCGTGG ACGTTCCAGC CGATGGCCGG CGGAGGTACG
GTTATCCTTG TCGAGGACAT CACGGAACGA CGCAAGGCGG AAGCCAAGAT CAATCATCTC
GCTCGCTTCG ATTCCTTGAC GGAACTGCCC AACAGGCTCA GCTTTCGTGA CGAAATAGAA
CGCCTGCTGG CATCCTTGAA CGGGGAGTCG CGGCTTTCCG CGCTGCTGTT CATCGATCTC
GATCAGTTCA AGCAGATCAA CGATACGCTC GGTCATCCCT GCGGCGACCG CCTGTTGTGC
ATGGTCGCCG ACCGGCTGAG GGGAATGCTG CGTCCTGAGG ATTTCGTCGC CCGGTTCGGC
GGCGACGAGT TCGTGGTGTT TCAGCAGAAT ATCCGGTCGC CGGAGGAGGC GTCCGCGCTC
GCCCGCCGTA TCGTCGAGCG GCTCGCGGAG CGATACGAGG TCGATCGCCA CCTTGTCGAG
ATCGGGGCGA GCATCGGTAT CGCGCTGACA TCGCCCGGCA TCACCGCTGA TAACCTTCTG
AAGCACGCGG ACATGGCGCT CTACCGTGCC AAGGCGGACG GCCGTGGAAC GTTCTGCTTC
TTCCGCGGCG AGATGGCCGA AACGGTCGAA TCGCGCCGCG TCCTCGAACT CGATCTGCGC
AAGGCGCTGG CCAGGGAAGA GTTCGAGCTG TTCTATCAGC CGCTGGTTCA TCTGAAGTCG
GGGCGGATCA CCACCTGCGA GGCGCTGCTG CGGTGGAATC ATCCGACGCG CGGGATGGTT
TCACCGATGG ACATCATTCC GGTGGCGGAG GAGATGGGGC TTATCCTCGA TCTCGGCCGC
TGGATTCTGC GCAAGGCCTG CATGGAATGC ATGAGGTGGC CGGAGGCCGT CAGCGTCGCC
GTCAACTTCT CCTCGCAGCA GTTCCATCAG CGCGACATCC TGAGCGAAGT CCGCTATGCG
CTTGAGGTTT CCGGGCTTCC AGCGCACCGC CTGGAAATCG AGATTACGGA GTCGTCGTTG
CTGCGCAACA CGGAGTGGAC GCACGACGCG CTGAGGCAGT TGCACTCGGC GGGCGTGAAG
ATTTCACTCG ACGACTTCGG TACGGGATAT TCAAGCCTCA GCTACCTGCA CAATTTCCCG
CTTCAGAAAG TCAAGATCGA TCGCTCGTTT CTGGAGGGGA TCGATACCGA CCGGCCCCTG
ATGCTGCTGC GTGGCGTGGC TCGGTTGAGC GCCGATCTCG GGATGGCCGT GGTCGTCGAA
GGCATCGAAA CCACCGAGCA GCTTGAACTC GTCAGCCTCG ACGGCACCGT GACGGAAGCG
CAAGGCTACC TGTTCAGCCG CCCGGTGTCC GGGGTCCGCA TCCGTGAGTT GCTCGATGCC
TCTCATGGGC GTTATCTGCA TGATAACAAT GTGAAGGCCG TGCGGTCGAT CGCCTAG
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| Protein sequence | MRAQPMQLVD HHRDTDTMSP AIYAALVGSL FQNPAPMFAG AACAAIAAVM TALKTGNHLL
WPCALLLVLI GLLRSFDMAK YKNRRSDLTV SEAGRWEARY QIGAVLYATA LGAWCAIALL
MTDDAVAHMI CISVTTGYVA AGAGRAYGLP WIFHLQILLT CGPMAGAMAL RGDPYYFGMA
LLTVLYFLGL ERITTRLQQI FLRALIARER EAALAGQFDT ALNNMPHGLC MFGADGRLGV
MNYRFNEMMH LADDFVHRGV GAVDVIAACV TAGTMSPENG RAIVSEIENS QAGAIVTADV
DLERGRALSW TFQPMAGGGT VILVEDITER RKAEAKINHL ARFDSLTELP NRLSFRDEIE
RLLASLNGES RLSALLFIDL DQFKQINDTL GHPCGDRLLC MVADRLRGML RPEDFVARFG
GDEFVVFQQN IRSPEEASAL ARRIVERLAE RYEVDRHLVE IGASIGIALT SPGITADNLL
KHADMALYRA KADGRGTFCF FRGEMAETVE SRRVLELDLR KALAREEFEL FYQPLVHLKS
GRITTCEALL RWNHPTRGMV SPMDIIPVAE EMGLILDLGR WILRKACMEC MRWPEAVSVA
VNFSSQQFHQ RDILSEVRYA LEVSGLPAHR LEIEITESSL LRNTEWTHDA LRQLHSAGVK
ISLDDFGTGY SSLSYLHNFP LQKVKIDRSF LEGIDTDRPL MLLRGVARLS ADLGMAVVVE
GIETTEQLEL VSLDGTVTEA QGYLFSRPVS GVRIRELLDA SHGRYLHDNN VKAVRSIA
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