Gene Nwi_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2713 
Symbol 
ID3674602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2947158 
End bp2948075 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID637714280 
ProductTPR repeat-containing protein 
Protein accessionYP_319318 
Protein GI75676897 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0957329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATGC TGTCGTCCCA TGCCTCTGCG CAATACGACA TCGATCCCGA ACTCCGCATT 
CAACAACTGG AACAGCAACT CCGAACGCTG ACCGGGCAGA ACGAAGAATT GCAGCATCGC
AATCGGATGC TGGAACAACA ATTGCGGCAG TTGCAGCCCG GGCAGGCGTC ATCAGGTGTC
GCGGCGACCG CGCCCGCAAG TCCCGGTCCC CAAGCTTCCA GTTCGCAGCA GCCGGGTTAT
GATCAGCGGG GAGGCCAGCC GCCGCTCGTG CAGGAGCAGG CGGCGACCGC GCCGGCGCAA
GGCCGCCGCG GGGATGCTTT CGATCCCAGC CAGAATCCCG GCGCTCCCGG TGCGCCGCGC
GCGCTGGGCG GTGGACAGAT GCCGATCCCG ACGGCGGCCG TGGGCTCGCC GGGTGGTCGT
GAAGCCGGCG CTCCGCTCGA TCTCGCCAAT GTCGGCCCAC GCTCTTCGGT GAGCCATCCG
GCAGCCGGTA GCGCTCCGCT CAGTACGGGC GGCCTGACGA CACTGCCGCC GTCGGCGACG
CCGCGCGACC AGTTCGACCT CGGCATCGGC TACATGCAGC GCAAGGACTA TGCGCTTGCC
GAAGAAACCA TGCGCAGCTT CACCGAGAAA TACCCCTCCG ACACGTTGAC GGGCGACGCT
CAGTACTGGC TGGGAGAGAG CCTGTTTCAG CGTCAGAAAT ATCGTGAAGC CGCTGAGGCT
TTTCTGGGCG TCACCACGAA ATACGACAGT TCGGCGAAGG TAGCCGATGC GTTGCTGCGG
CTCGGACAAT CGCTGGCCGC GCTGAAGGAA AAAGAGGCCG CCTGCGCGGC GTTTGGCGAG
GTCACGCGCA AATATCCCCG CGCCTCCGCC GGGGTGAAGC AGGCCGTGGA TCGCGAGCAA
AGGCGGGTGA AATGCTAG
 
Protein sequence
MLMLSSHASA QYDIDPELRI QQLEQQLRTL TGQNEELQHR NRMLEQQLRQ LQPGQASSGV 
AATAPASPGP QASSSQQPGY DQRGGQPPLV QEQAATAPAQ GRRGDAFDPS QNPGAPGAPR
ALGGGQMPIP TAAVGSPGGR EAGAPLDLAN VGPRSSVSHP AAGSAPLSTG GLTTLPPSAT
PRDQFDLGIG YMQRKDYALA EETMRSFTEK YPSDTLTGDA QYWLGESLFQ RQKYREAAEA
FLGVTTKYDS SAKVADALLR LGQSLAALKE KEAACAAFGE VTRKYPRASA GVKQAVDREQ
RRVKC