| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2689 |
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| Symbol | ispH |
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| ID | 3675548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2921580 |
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| End bp | 2922569 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637714255 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_319294 |
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| Protein GI | 75676873 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.663154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.709829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTGATT CGGTCCCGGA TCGCCTCATG AATGCTAAAC CGAAACTTAA AATCGTGCTC
TGTTCGCCCC GCGGCTTCTG CGCCGGGGTC GTCAGGGCGA TCGACACCGT GGAACGTGCG
CTGACGCTTT ATGGAGCGCC GGTGTATGTG CGTCACGAAA TCGTCCATAA TCGCTATGTT
GTGGACAGCC TTCGCGCCAA GGGAGCGATT TTCGTCGAGG AACTGGCGGA GATTCCCGAC
GACACCACGG CGCCAGTGGT TTTCTCCGCT CATGGCGTGC CGAAATCGGT TCCCGCGGAT
GCTCAGCGGC GCAATTTCTT CTCGCTCGAC GCCACCTGTC CGTTGGTGAC CAAGGTTCAC
CGCGAGGCGG CGATCCATTT CAAGCGAGGC CACGAGATTC TGCTGATCGG GCATTCTCAT
CATCCGGAAG TCGTCGGCAC CGTCGGGCAG TTGCCGGCGG GTGCGGTGAC CCTGATCGAG
ACCGCCGAGG ATGCCGAGAA ATTCACGCCG AAGGATGCCG ATAATCTGGC GTTCGTGACC
CAGACCACGC TGTCCATCGA CGACACCGCC GAGATCGTGG CGGTGCTGAA GCAACGCTTC
CCCAACATTC ATGGGCCGCA CAAGGAAGAC ATCTGTTACG CCACCACCAA TCGCCAGCTG
GCCGTCAAGA AGGTGGCGCC GGTGGTCGAC GCGCTGATCG TGGTCGGGGC GCCTAATTCC
TCCAACTCGC AACGGCTGCG CGAGGTTGCC GAGCGCGAGG GATGCAAGGT GTCTGTGCTT
GCGCAGCGCG CCGGCGATCT CGACTGGAGC ATGTTCGAGG GGATCAAAAG CCTCGGCATC
ACCGCCGGCG CGTCGGCGCC CGAAGTCATC GTCGAGGAAA TCATGGATGC ATTCGCGGCG
CGCTATGAAC TCGAGGTGGA GACGGTCTCG GCCGCGGAAG AAAACGAGTT CTTCCCGCTG
CCCCGCTCGC TGCGGCCGGA CGCCGCCTAG
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| Protein sequence | MGDSVPDRLM NAKPKLKIVL CSPRGFCAGV VRAIDTVERA LTLYGAPVYV RHEIVHNRYV
VDSLRAKGAI FVEELAEIPD DTTAPVVFSA HGVPKSVPAD AQRRNFFSLD ATCPLVTKVH
REAAIHFKRG HEILLIGHSH HPEVVGTVGQ LPAGAVTLIE TAEDAEKFTP KDADNLAFVT
QTTLSIDDTA EIVAVLKQRF PNIHGPHKED ICYATTNRQL AVKKVAPVVD ALIVVGAPNS
SNSQRLREVA EREGCKVSVL AQRAGDLDWS MFEGIKSLGI TAGASAPEVI VEEIMDAFAA
RYELEVETVS AAEENEFFPL PRSLRPDAA
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