Gene Nwi_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2600 
Symbol 
ID3675945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2825032 
End bp2826192 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content63% 
IMG OID637714166 
ProductDNA repair photolyase 
Protein accessionYP_319205 
Protein GI75676784 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.64054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.361396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAA CCTCGCCCGC CACCCGCAGA AACCCGGTCG TCACGTCGCC TCCCGCATCG 
GCGTTCGCGT CATCCTTCGC CGAGCTTGAG GTCGCGATCG ATCGCGAGCG GCGGAGGGGA
CGCGGCGCGC AATCCAATGT CAGCGGTCGA TTCGAGGCGG AGGCGCGAAC CGCATTCGAC
GATGGCTGGC AAAGCCTCGA CGATCTGCCG CCGTTCAAAA CCACGCTCGC TGTCGACGCC
GCGCGGAAAG TCATCACCCG CAACGAGTCG CCCGACATCA GTTTCGACCG CTCGATCAAT
CCTTACCGGG GCTGCGAGCA CGGCTGCGTC TACTGTTTCG CAAGGCCGAC CCATGCCTAT
CTCGGCCTGT CACCGGGGCT GGATTTCGAA TCGAAGCTGT TCGCGAAGCC GGACGCGCCC
GCCCTGTTGG AGAAGGAACT GGCCGCTGAG GGCTACGAGC CGAAAATGAT CGCGATCGGG
ACCAACACCG ATCCCTATCA GCCGATCGAG CGCGGCAGCA GGATCATGCG CGGCATCCTC
GAAGTGCTGG AGCGTGCGTC GCATCCGGTC GGCATCGTCA CGAAATCGGC GTTGGTGACA
CGCGACATCG ATATTCTTGC GCGAATGGCG AAGCGCAATC TCGCCAAGGT GGCGATTTCA
GTGACGTCGC TCGACGCCCG GCTCGCACGC TCGATGGAGC CGCGGGCGTC AACGCCGATG
CGGCGGCTGG AGGCATTGCG CAAGCTGTCG GAAGCAGGCA TTCCGACCAC GGTGATGGTG
GCCCCCGTGA TCCCGGTGCT GAACGACAGC GAGATCGAGC GGATTCTCGA TGCGGCCGCC
CATGCCGGTG TCAGGGAAGC CAACTATGTG CTGCTGCGGC TGCCGCTGGA AGTGCGCGAC
CTGTTCCGCG AATGGCTCAT GGCGAACTAT CCCGATCGCT ATCGTCATGT GTTCACGATG
ATCCGCGACA TGCGCAACGG CCGCGATTAC GATTCACAAT GGGGCGCGCG GATGAAGGGC
GCGGGACCGA TCGCATGGAT GATCGGCCGC CGCTTCGAGA TCGCCTGCGA GAAGCTTGGG
CTCAACAGGA AGCGCTCGAA GTTGACGACT GACCATTTCG CCAGGCCGAA ACGTAGCGGG
CAGCAGTTGA GCCTGTTCTG A
 
Protein sequence
MSRTSPATRR NPVVTSPPAS AFASSFAELE VAIDRERRRG RGAQSNVSGR FEAEARTAFD 
DGWQSLDDLP PFKTTLAVDA ARKVITRNES PDISFDRSIN PYRGCEHGCV YCFARPTHAY
LGLSPGLDFE SKLFAKPDAP ALLEKELAAE GYEPKMIAIG TNTDPYQPIE RGSRIMRGIL
EVLERASHPV GIVTKSALVT RDIDILARMA KRNLAKVAIS VTSLDARLAR SMEPRASTPM
RRLEALRKLS EAGIPTTVMV APVIPVLNDS EIERILDAAA HAGVREANYV LLRLPLEVRD
LFREWLMANY PDRYRHVFTM IRDMRNGRDY DSQWGARMKG AGPIAWMIGR RFEIACEKLG
LNRKRSKLTT DHFARPKRSG QQLSLF