Gene Nwi_2592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2592 
Symbol 
ID3675021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2815046 
End bp2816056 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID637714158 
Productpolyprenyl synthetase 
Protein accessionYP_319197 
Protein GI75676776 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.114773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGTCA TCGTCCCCTT CGAAAGCCAG CCGGCAGGCT CCATCGACCA GCTCGTCGAA 
CTCGTCGCCG CCGACATGGA ACGCGTCAAC GCCACCATCC TGTCGCGGAC CGGATCAGAC
GTCACGATGA TCCCGGAAGT CGCCAACCAC CTGATCTCGT CCGGCGGCAA GCGGCTGCGC
CCGATGCTGA CGCTGGCGAT GGCCAATCTC GCCGGCTATG CCGGCGAAGG CCATGTCAAG
CTCGCGGCCT CGGTGGAATT CATGCACACC GCGACGCTGC TGCACGACGA CGTGGTCGAC
GAAAGCGAGC TGCGCCGCGG CAGGCTGTCG GCCCGCATGG TGTGGGGCAA CGAGGCCAGC
GTTCTCGTCG GCGACTTCCT GCTCGGACAG GCGTTCCGCA TGATGGTCGA GGTCGGCTCG
CTGCGGGCGC TCGACATCCT GTCTTCGGCA GCGGCGACCA TCGCCGAGGG CGAAGTCATG
CAGCTTGCGG CGGCGAAGAA CACGGCTACG ACCGAGGACG AATACCTCGC GGTCATTCGC
GGCAAGACGG CCGAACTGTT CGCCGCGGCC TGCGAGGTCG GCCCGGTGCT CGGCGGCCGT
CCGAAGGCCG AGCAGACGGC GGCCGCGAGT TTCGGCATGA ATCTCGGCAT CGCCTTCCAG
CTTGTCGATG ACGTGCTCGA CTACGGGGGC AAGTCGGCGA AGCTCGGCAA GAACGTCGGC
GACGACTTTC GCGAGGGCAA GATCACGCTG CCGGTGGTGC TGGCGTTTCG GCGCGGCAAT
GATGTCGAGC GCGAATTCTG GGTGCGGGCG CTCGAGCAAG GCAAGATCGG CGACAACGAT
CTCAATCACG CCATCGGGCT GATGACCAAG CATCGCGCGC TGGAGGATAC CCTCAACCGC
GCCCATCACT ACGGCGCGAT GGCGGTCGAT GCGCTGGCGC TGTTTCCGCC GTCGCCGATG
AAGGGCGCGC TGGAGCAGGT CGTGGCGTTC TGCCTGGCGC GGTCGCACTG A
 
Protein sequence
MAVIVPFESQ PAGSIDQLVE LVAADMERVN ATILSRTGSD VTMIPEVANH LISSGGKRLR 
PMLTLAMANL AGYAGEGHVK LAASVEFMHT ATLLHDDVVD ESELRRGRLS ARMVWGNEAS
VLVGDFLLGQ AFRMMVEVGS LRALDILSSA AATIAEGEVM QLAAAKNTAT TEDEYLAVIR
GKTAELFAAA CEVGPVLGGR PKAEQTAAAS FGMNLGIAFQ LVDDVLDYGG KSAKLGKNVG
DDFREGKITL PVVLAFRRGN DVEREFWVRA LEQGKIGDND LNHAIGLMTK HRALEDTLNR
AHHYGAMAVD ALALFPPSPM KGALEQVVAF CLARSH