| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2589 |
|---|
| Symbol | |
|---|
| ID | 3675623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2812821 |
|---|
| End bp | 2813699 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637714155 |
|---|
| Product | peptidase S49 |
|---|
| Protein accession | YP_319194 |
|---|
| Protein GI | 75676773 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.901075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.113657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGG TGAAAACAGC GCTGACGAAG CTCATTCCCA GGCGATGGCG GCGCGGGACC
AGCGTGGTGC CCGTGGTGCG ATTGTCCGGG GTGATCGGCG CGGTCACGCC GCTCAGGCCG
GGCATGACGC TGGCGGGCGT CGCCCGAACG CTGGAGCGGG CGTTCGCGGT TGCTGACGCC
AAGGCGGTGG CGCTGGTGGT CAATTCGCCG GGCGGATCGC CGGTGCAGTC CCGCCAGATC
TATCTGCGCA TCCGGCAACT GTCGCGGGAG AAAGAGATTC CGGTTCTGGT GTTCGTCGAG
GATGTCGCCG CTTCGGGCGG TTACATGATC GCCTGCGCGG GCGACGAGAT TTTCTGCGAT
CCCTCGTCGA TCCTCGGTTC GATCGGCGTG GTCGGAGGCG GTTTCGGCTT TACCGAACTG
ATCAGGAAAA TCGGCGTCGA GCGCAGGCTG TATACCGCAG GCGAACACAA GGCGACGCTC
GATCCCTTTC TTCCGGAGAA TCCCGACGAT GTGGCGCGGC TGAAAGCGAT CCAGCGCGAG
ATCCACGCCA CCTTCATCGA ACTGGTGAAG GCGAGCCGCG GGGGACGGCT GAAAGGAGCG
GACGATCTTT TGTTCACCGG CGAATACTGG GCCGGCGAGC GTTCGGTCGC GCTCGGTCTT
GCGGACGGGA TCGGCGATCT TCGCTCGACG CTGCGGGCCC GGTTTGGAGA TAAGGTGAGC
ACACCGCTGA TAGCGCCCTC GACCGGTCTG TTGTCGGGAC TGTTGGGTCG TAAAGCAGGC
GCCGGGACCC TGACCTTACA AGGTGGCATG GCGGGGATGC CGGACGAGCT GATTTCCGCG
CTCGAAACGC GCGCAATCTG GGCCAGATTC GGTCTTTGA
|
|---|
| Protein sequence | MSRVKTALTK LIPRRWRRGT SVVPVVRLSG VIGAVTPLRP GMTLAGVART LERAFAVADA
KAVALVVNSP GGSPVQSRQI YLRIRQLSRE KEIPVLVFVE DVAASGGYMI ACAGDEIFCD
PSSILGSIGV VGGGFGFTEL IRKIGVERRL YTAGEHKATL DPFLPENPDD VARLKAIQRE
IHATFIELVK ASRGGRLKGA DDLLFTGEYW AGERSVALGL ADGIGDLRST LRARFGDKVS
TPLIAPSTGL LSGLLGRKAG AGTLTLQGGM AGMPDELISA LETRAIWARF GL
|
|---|
| |