Gene Nwi_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2467 
Symbol 
ID3674684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand+ 
Start bp2689861 
End bp2690505 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content64% 
IMG OID637714033 
Productthiamine monophosphate synthase 
Protein accessionYP_319072 
Protein GI75676651 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.571514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.992674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTATC CTGATCGCTC CGCGTATCCT GATCGCAACG CGTACCCTGA TCGCTTCTAT 
CCTGTGGTCG ACACGCTGGA CTGGGTGCGC CGCCTGACCG GACTCGGCGT GGGGACGGTG 
CAGTTGCGCG CCAAGGACCT CAACGACGGC GAAGCTTTGC AACTGGTCAG CGACGCGCTG 
GAGATCGTCA AGGACACGCC GGTCCGGCTC GTGGTCAACG ACTACTGGCG CGCGGCGATC 
GTGGCCGGGG CGAAGCACCT TCATCTCGGC CAGGAAGATC TGGCGACGGC GGATGTTCAC 
GAGATCCGCA AGGCCGGGCT GACGCTCGGC CTCTCCACCC ATGACGACGC CGAACTCGAA 
ACCGCGCTCG CAGCCGAGCC GGACTATATC GCGCTCGGCC CGATATTTCC GACCACGCTG 
AAAGCGATGC GGTTCGCGCC GCAAGGCATT CCAAAGATCA CCGAATGGAA GCAGCGCGTC 
GGCAACATCC CGCTGGTCGC GATCGGCGGA ATCAAGCTGG AGCAGGCGCC GGAGATTTAT 
GCCGCCGGCG CGGACTCGAT CGCCGTGGTC AGCGACATCA CGCAGAACCC TGATCCCGAT 
GCACGGGTCA AAGCCTGGCT CGACCAGATG ATTGAACCCG CATGA
 
Protein sequence
MQYPDRSAYP DRNAYPDRFY PVVDTLDWVR RLTGLGVGTV QLRAKDLNDG EALQLVSDAL 
EIVKDTPVRL VVNDYWRAAI VAGAKHLHLG QEDLATADVH EIRKAGLTLG LSTHDDAELE 
TALAAEPDYI ALGPIFPTTL KAMRFAPQGI PKITEWKQRV GNIPLVAIGG IKLEQAPEIY 
AAGADSIAVV SDITQNPDPD ARVKAWLDQM IEPA