Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_2431 |
Symbol | |
ID | 3674583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 2652806 |
End bp | 2653861 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637713995 |
Product | pseudouridine synthase, RluD |
Protein accession | YP_319037 |
Protein GI | 75676616 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0293774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGCT CGGCTCTCAA GGGCTCACCA TCGGATCAGA GGCTGGACGT TGTTGTCACC GGCGACGAGG GGGCAGTGCG CCTTGATCGT GTCCTTGCCG TTCATAGCCC AGATCTGTCG CGATCACGCC TGAAGTCCCT GATTCTCGCG GGTCACGTCA GTATTGTGAA AAAAGCTTCT GTTGCGGAGA GGACGGAAGG CCCGGTCCCT GTTCGCGACC CCGCTTATCA TGTTGCTCCG GGAGATACGA TCACAATCCA CGTGCCGCCG GCAATATCGG CCAAACCGCA AGGGGAAGCC ATCGCGCTGG ATATCATCTA CGAAGACGAT GATCTCATCG TCATCAACAA GCCGAAGGGT CTGGTTGTTC ATCCCGCGGC AGGCCACCAC ACAGGAACGC TGGTCAATGC ACTCATTGCG CATTGCGGGG AAACTCTGTC CGGCATCGGC GGCGTCTGTC GGCCCGGCAT CGTGCACCGG CTGGACAAGG ACACCACCGG CCTGATGGTG GCCGCCAAGA ATGATGCCGC CCACAAGTCG CTGGGCGCGC AATTCGCGGA TCACGGACGC ACGGGAGCAA TGCGACGCGG TTACCTGGCT TTTGTCTGGG GACTGCCGAA CCGTTCCCAC GGCACAGTCG ACGCCCCGAT AGACCGGCAC CCTTACGCGC GCGAAAAAAT GGCCGTGCGC GCAGGCGGGC GGGAGGCGAT CACCCATTGG GAGGTCCGGC AGGCCTTCAA TGGCCGGGAC GGAAAACCGG TGGCCGCTCT GCTCGCGTGT CAACTAGCCA CCGGCCGCAC CCACCAGATC CGGGTGCATC TCGCCCATGT CGGCCACCCG CTGATGGGTG ATGGCGTGTA TGGTCCCCAT TTCAGGACCA AGGTCAGTCA TCTGGGAGAG CGAGCCGCCG CGGCGCTCAG CGCTCTCGGC CGGCAGGCGC TTCACGCGTC CCTTCTGGTC CTTGAACATC CCCGGACCGA GAAGGTTCTG CGCTGGGAAA CGGGGCTGCC GGAGGACTTG TCTTCTCTGC AAATGGCCCT GGTGGCGGCG GAATGA
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Protein sequence | MQGSALKGSP SDQRLDVVVT GDEGAVRLDR VLAVHSPDLS RSRLKSLILA GHVSIVKKAS VAERTEGPVP VRDPAYHVAP GDTITIHVPP AISAKPQGEA IALDIIYEDD DLIVINKPKG LVVHPAAGHH TGTLVNALIA HCGETLSGIG GVCRPGIVHR LDKDTTGLMV AAKNDAAHKS LGAQFADHGR TGAMRRGYLA FVWGLPNRSH GTVDAPIDRH PYAREKMAVR AGGREAITHW EVRQAFNGRD GKPVAALLAC QLATGRTHQI RVHLAHVGHP LMGDGVYGPH FRTKVSHLGE RAAAALSALG RQALHASLLV LEHPRTEKVL RWETGLPEDL SSLQMALVAA E
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