Gene Nwi_2431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2431 
Symbol 
ID3674583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2652806 
End bp2653861 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID637713995 
Productpseudouridine synthase, RluD 
Protein accessionYP_319037 
Protein GI75676616 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0293774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCT CGGCTCTCAA GGGCTCACCA TCGGATCAGA GGCTGGACGT TGTTGTCACC 
GGCGACGAGG GGGCAGTGCG CCTTGATCGT GTCCTTGCCG TTCATAGCCC AGATCTGTCG
CGATCACGCC TGAAGTCCCT GATTCTCGCG GGTCACGTCA GTATTGTGAA AAAAGCTTCT
GTTGCGGAGA GGACGGAAGG CCCGGTCCCT GTTCGCGACC CCGCTTATCA TGTTGCTCCG
GGAGATACGA TCACAATCCA CGTGCCGCCG GCAATATCGG CCAAACCGCA AGGGGAAGCC
ATCGCGCTGG ATATCATCTA CGAAGACGAT GATCTCATCG TCATCAACAA GCCGAAGGGT
CTGGTTGTTC ATCCCGCGGC AGGCCACCAC ACAGGAACGC TGGTCAATGC ACTCATTGCG
CATTGCGGGG AAACTCTGTC CGGCATCGGC GGCGTCTGTC GGCCCGGCAT CGTGCACCGG
CTGGACAAGG ACACCACCGG CCTGATGGTG GCCGCCAAGA ATGATGCCGC CCACAAGTCG
CTGGGCGCGC AATTCGCGGA TCACGGACGC ACGGGAGCAA TGCGACGCGG TTACCTGGCT
TTTGTCTGGG GACTGCCGAA CCGTTCCCAC GGCACAGTCG ACGCCCCGAT AGACCGGCAC
CCTTACGCGC GCGAAAAAAT GGCCGTGCGC GCAGGCGGGC GGGAGGCGAT CACCCATTGG
GAGGTCCGGC AGGCCTTCAA TGGCCGGGAC GGAAAACCGG TGGCCGCTCT GCTCGCGTGT
CAACTAGCCA CCGGCCGCAC CCACCAGATC CGGGTGCATC TCGCCCATGT CGGCCACCCG
CTGATGGGTG ATGGCGTGTA TGGTCCCCAT TTCAGGACCA AGGTCAGTCA TCTGGGAGAG
CGAGCCGCCG CGGCGCTCAG CGCTCTCGGC CGGCAGGCGC TTCACGCGTC CCTTCTGGTC
CTTGAACATC CCCGGACCGA GAAGGTTCTG CGCTGGGAAA CGGGGCTGCC GGAGGACTTG
TCTTCTCTGC AAATGGCCCT GGTGGCGGCG GAATGA
 
Protein sequence
MQGSALKGSP SDQRLDVVVT GDEGAVRLDR VLAVHSPDLS RSRLKSLILA GHVSIVKKAS 
VAERTEGPVP VRDPAYHVAP GDTITIHVPP AISAKPQGEA IALDIIYEDD DLIVINKPKG
LVVHPAAGHH TGTLVNALIA HCGETLSGIG GVCRPGIVHR LDKDTTGLMV AAKNDAAHKS
LGAQFADHGR TGAMRRGYLA FVWGLPNRSH GTVDAPIDRH PYAREKMAVR AGGREAITHW
EVRQAFNGRD GKPVAALLAC QLATGRTHQI RVHLAHVGHP LMGDGVYGPH FRTKVSHLGE
RAAAALSALG RQALHASLLV LEHPRTEKVL RWETGLPEDL SSLQMALVAA E