Gene Nwi_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2405 
Symbol 
ID3675958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2627501 
End bp2628709 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content58% 
IMG OID637713969 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_319011 
Protein GI75676590 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.12432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.378018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTT CAGCGCAAGC CGGGCCTGCG GTAGAGGCGT GTTTTCTGTC TTCAATACTT 
GAAGCAGTCG ATCTTGCTCT TTCGTCAGCC AAGCGACCCG TTGCGTTGCA TGAACCGCGT
TTCGGGGCGC GGGAGCGCGA GCTTGTCATG GATTGCGTCG ACACCGGTTG GGTATCTTCC
GCCGGTCGAT ACGTTACGCT TTTCGAGGAG ATGGTCGCTT CTGCCGTTGG TGTTCCACAT
GCGGTCGCGG TGGTTAACGG CACCACGGCC CTCCACGCGG CTCTGGTGCT GGAGGGCGTG
AGGCCGGGCG ACGAAGTCAT CGTGCCGTCG ATTACCTTCG TGGCAACAGC CAATGCCGTT
AGCCATGCGG GAGCGGTACC TCATTTCGTC GATTCGACGT GGATGACAAT GGGGCTTGAT
CCCGTCGCAC TGGACGAACA CCTGCAACAG GTTAGCGAGC GGCGCGATGG ACAGTTGTTC
AATCGGCAAA CTGGTAGACG CATCCGCGCC GTCGTTCCCG TTCATGTTTT TGGTCACCCT
GTCGACGTCC CTCAACTGCA AGCGCTGTTG GCCAAATATG ATCTCATCTT CATTGAAGAT
GCGACGGAGT CGCTCGGCTC GACCTGGAAG GGTCAAGCGT GCGGAACGTT TGGCCACTCC
GCAGTTCTGA GCTTCAATGG CAACAAGATC ATTACGACTG GTGGCGGTGG TATGATCCTG
ACGGCAGACG ATCAGTATGC CCGGCGTGCC CGCCATCTCA CGACGACGGC AAAGATCGCG
CACCAGTGGG CATTCGAGCA TGATGAGGTG GGGTATAATT ATCGGCTACC CAACATCAAT
GCGGCCTTGG GATGTGGCCA AGTTGAGCGG TTGCCGGAGA TGGTCGCAGC CAAGCGCGCC
TTGGCGACTC GATATATGCA GGTATTCGAA AATGTTTCTG GCGCCCGCAT TTTCCGAGAG
CCGGGTGGTG CAGCCAGCAA CTATTGGCTG AACACGCTTG TGCTCGATCG CGAATTCTCG
GACGAGCGTG ACGCGCTGTT GTCGATGCTA CACGCCAACG GCATCCAGGC GCGTCCGTTA
TGGACCCCGC TGCATTTGTT GCCGATGTAT AGTGATTGTC CCCGCGCGCC GCTGCCCGTG
GCCGAGGATA TGTTTACACG ATGCATTAAT CTACCCAGTA GTCCGTTTCT CTCGGGCGAG
CGGAATTGA
 
Protein sequence
MAISAQAGPA VEACFLSSIL EAVDLALSSA KRPVALHEPR FGARERELVM DCVDTGWVSS 
AGRYVTLFEE MVASAVGVPH AVAVVNGTTA LHAALVLEGV RPGDEVIVPS ITFVATANAV
SHAGAVPHFV DSTWMTMGLD PVALDEHLQQ VSERRDGQLF NRQTGRRIRA VVPVHVFGHP
VDVPQLQALL AKYDLIFIED ATESLGSTWK GQACGTFGHS AVLSFNGNKI ITTGGGGMIL
TADDQYARRA RHLTTTAKIA HQWAFEHDEV GYNYRLPNIN AALGCGQVER LPEMVAAKRA
LATRYMQVFE NVSGARIFRE PGGAASNYWL NTLVLDREFS DERDALLSML HANGIQARPL
WTPLHLLPMY SDCPRAPLPV AEDMFTRCIN LPSSPFLSGE RN