Gene Nwi_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2396 
Symbol 
ID3675949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2616551 
End bp2617666 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content63% 
IMG OID637713960 
ProductNeuB, antifreeze-like protein 
Protein accessionYP_319002 
Protein GI75676581 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID[TIGR03569] N-acetylneuraminate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.503393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCTCAG CTCCTCGGAA AAGATCGGAC TTTATGCTGC AGCGTGCCCG TATCATCGCG 
GAGGCGGGGG TCAACCATAA TGGCGATCTT GCCCGGGCGC TGGCGCTGGT GGATACCGCC
GCGCGCGCGG GCGCGGACAT CATCAAATTC CAGTCGTTCC GGGCCGACAA GCTGGCGACT
CCGGCCGCCG CCAAGGCCAG CTACCAGCAG GCGACGACCG GCGGCGGTCA ATCCCAGTTG
GAGATGCTGC GCTCGCTCGA GTTAAGCGAG AGCGAAGAGC GCGAGATTGC CGCGGCCTGC
GCGGCGGCAA ACATCGGCTA TCTGTCGACG CCATTCGATG CCGACAGCGC CACCCATCTT
GTCAGGCATG TCGGCGTCTC CGCATTCAAG GTCGGTTCGG GAGATCTGAC CAATGCGCCC
TTGCTGCTTC ACCTGGCGCG CTTCCGTTTG CCCGTCATCC TCTCCACCGG CATGGGAACG
CTGGCGGAGA TTGAACAGGC GCTGGGAGTT ATCGCGTTCG GGTACTTCCG GGAAGAGGCC
GCGCCGTCCA CGTCACGCGC TTTTTCCGAG GTGCTTTTGG AGCGCCGCGC CTGGTCGATG
CTGCGGGAAA AGGTAACCTT GCTGCATTGT ACAACGGAAT ACCCGGCAGC CGCACATTCG
ATCAATTTGC GCGCGATGGC CTCATTGCGC GAGGCGTTCG GTCTGGAGGT CGGCTTTTCC
GATCACAGCG TGGGCATTCA TCTAGCGGTT GCCGCGGTCG CACTGGGCGC GACCGTCATT
GAGAAGCACT TCACGCTCGA CCGGAATCTG CCGGGCCCGG ATCATCGCGC GTCGCTCGAG
CCCGATGAAC TGACGGCCAT GATCGCCGCC ATACGGGACG TCGAGAGTGC GATGGGCGAC
GGGCGGAAGA TTCCCGCTCC GGAAGAACTG GCCAATCGTT CCGTGGCGCG CAGGAGTCTG
GTTGTCACGC GGCGCGTGTG CCGGGGTGAG AGATTTTCGG CAGACAACCT CGGGGTCAAA
CGTCCGGGCA ATGGCGTCTC CCCAATGGAA TTCTGGACCT ATCTCGATCA GGTTGCCCCT
CGCGACTATG AGGTCGACGA GGCGATCGAG CCATGA
 
Protein sequence
MSSAPRKRSD FMLQRARIIA EAGVNHNGDL ARALALVDTA ARAGADIIKF QSFRADKLAT 
PAAAKASYQQ ATTGGGQSQL EMLRSLELSE SEEREIAAAC AAANIGYLST PFDADSATHL
VRHVGVSAFK VGSGDLTNAP LLLHLARFRL PVILSTGMGT LAEIEQALGV IAFGYFREEA
APSTSRAFSE VLLERRAWSM LREKVTLLHC TTEYPAAAHS INLRAMASLR EAFGLEVGFS
DHSVGIHLAV AAVALGATVI EKHFTLDRNL PGPDHRASLE PDELTAMIAA IRDVESAMGD
GRKIPAPEEL ANRSVARRSL VVTRRVCRGE RFSADNLGVK RPGNGVSPME FWTYLDQVAP
RDYEVDEAIE P