| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2288 |
|---|
| Symbol | |
|---|
| ID | 3675736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 2501580 |
|---|
| End bp | 2502854 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637713851 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_318894 |
|---|
| Protein GI | 75676473 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.637416 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCC ACAATTCCGG CTCTCCCGAA GCTTCAGGGA TGTCCAGCGT CGCGCTCGCG
CGCATTGATG ATCACCTGAA GCGACGATAC ATCGATGCCG GCCGGTTTCC GGGCACACAG
CTGATGGTGT ATCGCCGCGG CAGCCTCGTG CACCACTCCG TGCAGGGTTT CGCCGATCTG
GAACGCAAGG TGCGGCTGAA GGGCGACGCC ATCTTCCGCA TCTATTCCAT GACCAAGCCG
ATCACCTCGG TGGCTTTCAT GATGCTGGTG GAACAGGGCC TGGTTGCGCT CGACGATCCC
GTTCACAGGT ATATTCCCGA ATGGAAGAAC CTTGGCGTGT TCCAGGCGGG CGCCGCGCCT
GCTTTCATGA CCAGGCCGCC GTCGCGGCCG ATGCAGATCG TCGACCTGCT CCGCCACACA
TCCGGACTGA CCTACGGTTT CCAGCAGCGG ACCAACGTCG ACGCGGCGTA TCGCGACAAG
CGGATCGGCA CGCTCGACCC TGAGGGAACG CTCGCTTCGA TGATCGCAGA TCTTGCCGGT
ATTCCGCTGG AATTCTCGCC GGGCGAGGCC TGGAATTACT CGGTCTCCAC GGATGTGATC
GGCTATCTCA TCGGCAGGAT CAGCGGCATT CCCTTCGACC GGTACTTGAA AGAGCGCATT
TTCGACCCGT TGGAAATGGC CGACACCGGC TTCTTCGTGC CGGCCGGCAA GGCGCACCGG
CTCGCGGCCT GCTATAGCGC TGATGCAGGC GGCATGGTGC CGGCCCGTTC GCCGGGTGCG
ACGAGTGGAC TGACGTTGCA GGACGATCCC GCCACCAGCC CGTTTCTCTC CCCGCCCGGC
TTCGTCTCGG GAGGCGGCGG CCTGTGCTCG ACGGCCACCG ACTACCTCAC CTTCTGCCGG
GCGCTGCTCA ACGGCGGTGA ACTCGGGGGC GTCAGGCTGA TCGGGCCGAA AACGCTGGCG
CTGATGACGA GCAATCATCT GCCCGGCAAT CGGGACTTGC CGGAGATGTC GCGATCCATG
TTCGCGGAGG CGACCTACAG CGGCATCGGC TTCGGACTCG GCTTCGCCGT CACCATCAAT
CCCGCAAAGA CGCTGATAGC CGGAAGTCCC GGCGAATATG CCTGGGGCGG CGTTGCGACG
ACGTCGTTCT GGATCGATCC GGCGGAAGAG TTGATCGCCA TCTTCATGAC GCAGGTGATC
CCTTCGACCG CCTATCCTGT CCGACGCGAA CTTCGCACCA TGGTGTATGC GGCCATCACC
GACTCCAATC CTTGA
|
|---|
| Protein sequence | MTTHNSGSPE ASGMSSVALA RIDDHLKRRY IDAGRFPGTQ LMVYRRGSLV HHSVQGFADL
ERKVRLKGDA IFRIYSMTKP ITSVAFMMLV EQGLVALDDP VHRYIPEWKN LGVFQAGAAP
AFMTRPPSRP MQIVDLLRHT SGLTYGFQQR TNVDAAYRDK RIGTLDPEGT LASMIADLAG
IPLEFSPGEA WNYSVSTDVI GYLIGRISGI PFDRYLKERI FDPLEMADTG FFVPAGKAHR
LAACYSADAG GMVPARSPGA TSGLTLQDDP ATSPFLSPPG FVSGGGGLCS TATDYLTFCR
ALLNGGELGG VRLIGPKTLA LMTSNHLPGN RDLPEMSRSM FAEATYSGIG FGLGFAVTIN
PAKTLIAGSP GEYAWGGVAT TSFWIDPAEE LIAIFMTQVI PSTAYPVRRE LRTMVYAAIT
DSNP
|
|---|
| |