Gene Nwi_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2209 
Symbol 
ID3676877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2401671 
End bp2402585 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content59% 
IMG OID637713772 
Productbranched chain amino acid ABC transporter permease 
Protein accessionYP_318815 
Protein GI75676394 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.396823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.65944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATT TTGCCCAGCA ACTGATCAAC GGCGTCGTGC TCGGCTCGAT CTATGGGCTG 
ATCGCGACCG GCTATACGAT GGTTTACGGC ATTGTCGGCA TGATCAATTT CGCTCACGGC
GACATCTTCA TGATCGGCGG CTTCATCGCG CTGATCACCT TCCTGATCCT GATGTCGATG
GGCCTCTCCG CCGTGCCGCT GATCCTGCTC GTCATGCTCA TCGTTTCAAT GGCCGTCACC
GCCGTTTACG GCTGGGTTGT CGAGCGCATC GCCTACAGGC CCCTGCGCCA GTCGTTTCGA
CTCGCGCCGC TGCTGTCGGC GATCGGCATG TCGTTCGTAC TCATGAATTT TTCGCAGGTT
TCCCAGGGCG CGCAGGTCAA GCCGATCCCG CCGCTCATCA CCGGCGGCTA CACGCTGCAC
GATTCTGGAA ACTTCGCGGT CCAGCTATCC AATGTCCAGA TCGTGGTGGT GACCACCACC
ATCGTGCTGC TCGCGATCTT CAGCTACATC GTGTCGCGTA CGCGCTTCGG CCGCGATATG
CGCGCCTGCG AGCAGGATCA GACCATGGCG GCGCTTCTCG GCGTGAACGT CGATCGCACC
ATCTCGATGA CTTTCGTGAT CGGGGCGTCG CTCGCCGCCG TCGCCGGAAT GATGTACCTG
CTGTATTATG GCCTTGTTGA TTTCTTCATG GGCTTCGTCG CCGGCATCAA GGCATTCACG
GCCGCGGTTC TCGGCGGCAT AGGCTCGCTG CCCGGCGCGA TGCTCGGCGG CCTTGCGATC
GGGCTGATCG AGACGTTCTG GTCGGCTTAC TTTTCGATCG AGTATAAGGA TGTTGCAGCC
TTCTCGATCC TGATCATCGT GCTGATCTTC ATGCCTACCG GCCTGCTTGG CCGTCCCGAA
GTCGAAAAAG TCTGA
 
Protein sequence
MDYFAQQLIN GVVLGSIYGL IATGYTMVYG IVGMINFAHG DIFMIGGFIA LITFLILMSM 
GLSAVPLILL VMLIVSMAVT AVYGWVVERI AYRPLRQSFR LAPLLSAIGM SFVLMNFSQV
SQGAQVKPIP PLITGGYTLH DSGNFAVQLS NVQIVVVTTT IVLLAIFSYI VSRTRFGRDM
RACEQDQTMA ALLGVNVDRT ISMTFVIGAS LAAVAGMMYL LYYGLVDFFM GFVAGIKAFT
AAVLGGIGSL PGAMLGGLAI GLIETFWSAY FSIEYKDVAA FSILIIVLIF MPTGLLGRPE
VEKV