Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1938 |
Symbol | |
ID | 3674782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 2125727 |
End bp | 2126677 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637713503 |
Product | CRISPR-associated Csh2 family protein |
Protein accession | YP_318550 |
Protein GI | 75676129 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family [TIGR02589] CRISPR-associated protein, Csd2 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.364907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGC TCACGAACCG CTACGATTTC GTCCTGCTCT TCGACGTAAC CAAAGGCAAT CCGAATGGCG ATCCTGACGC CGGAAACCTG CCGAGGCTCG ATCCCGAAAC CAACCACGGG CTGGTGTCGG ACGTCAGCCT GAAACGCAAG GTGCGTAACT ACGTCGATCT CGTCCGATCC GGAACCGATG GCCACCACAT CTATGTCGAG GAGGCCGCGA TCCTCAACGA CAAGCACCGC CAAGCCTACA AGGCACTACG GCCGGACGAT CCGAAGGTTG ATAAAGAAGC CAAGCTCAAC CCGAGGGATG ATGTCGAGGC GAAGAAGCTG CGGGAGTTCA TGTGCAAGAA CTTCTTCGAC GTGCGTACCT TTGGCGCAGT CATGTCGACC GGCATCAATG CCGGTCAGGT CAGAGGCCCC GTGCAGATGA CCTTCGCCAA CTCGGTCGAG CCCATCGTGC CGCAGGAAAT TTCGATTACC CGCATGGCCG CCACCAACGA GGCGGAGAAG AAGCAACGGG CCGAAGGCGG TGAGGAAGGC AACGACCGGG TCGACAATAG GACGATGGGA CGCAAGTACA TTGTGCCCTA TGGGCTCTAC CGCGCGCATG GTTTCGTCTC GGCTAAGCTC GCCGAGCGCA CCGGTTTCTC CGAGGCCGAC CTCGAACTGA CGTTCGAGGC GCTGACCAGT ATGTTCGAGC ACGATCGCTC CGCCGCGCGC GGCGAGATGA CGACGCGCAA GCTCGTCGTC TTCAAGCACG GCAACGCGCT TGGCAGTGCG CCAGCGCATG CGCTGTTCGA GCGCGTCAGA ATCGGCCGCA ACATCGACGG GCAGTTCCGA AGGATCGACC GGTCGGACAA CTATCCGCCG GCACGTGCCT TTTCGGATTA CGCCGTGGAG ATCGACCGCG ACAATCCGCC AGACGGCGTG GAAATCATTG AAAGGATCTG A
|
Protein sequence | MTMLTNRYDF VLLFDVTKGN PNGDPDAGNL PRLDPETNHG LVSDVSLKRK VRNYVDLVRS GTDGHHIYVE EAAILNDKHR QAYKALRPDD PKVDKEAKLN PRDDVEAKKL REFMCKNFFD VRTFGAVMST GINAGQVRGP VQMTFANSVE PIVPQEISIT RMAATNEAEK KQRAEGGEEG NDRVDNRTMG RKYIVPYGLY RAHGFVSAKL AERTGFSEAD LELTFEALTS MFEHDRSAAR GEMTTRKLVV FKHGNALGSA PAHALFERVR IGRNIDGQFR RIDRSDNYPP ARAFSDYAVE IDRDNPPDGV EIIERI
|
| |