Gene Nwi_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1936 
Symbol 
ID3676792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2124041 
End bp2125075 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content68% 
IMG OID637713501 
Producthypothetical protein 
Protein accessionYP_318548 
Protein GI75676127 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAGC TCCTCAACAC GGTCTATGTC ACGACTGAGG GAGTGGCGCT GCGCAAGGAC 
GGAGAGAACC TCGTGGCGGA GGTGGAAGGC GAGGAGCGGG CCCGCGTGCC GCTCCACATG
CTTGCCTCGT TGGTTGTTTT CGGACCGATC CACATTTCGC CTGCATTGAT GGCGGCCTGC
GCCGGCGCCG GCATCGCGAT CGCGCTGCTC GACCGCAACG GCCGCTTTCG GGCCCGCGTC
GAAGGACCGG TGACTGGCAA TGTGTTGTTG AGGCGGGCAC AATACCGGGT CTCGGAGGCT
CCGGAGCCCG TCGTGCGGTC GATCCTCGTC GGCAAGGTGG CCAACCAGCG CTCCGTCTTG
ATGCGCGCCT TGCGTGATCA CCGCGAGGAG CTCGAGCCCG GCGATCGCGA CGCGATAACC
GCCGTGACGG AGCGCCTTGC CTTCATCCTG CGCCGGGTGG AGCGCTCCGA TGGCGGTCTC
GATGTGCTAC GCGGCGCGGA GGGAGAGGCG GCGAACCTCT ATTTCTCGGT CTTCGACAAT
CTCCTGCGCG TGCCCGACCC GGACTTGCGC TGGAAGGGGC GCTCGCGTCG GCCGCCGCTC
GATCCCATCA ACGCGCTGCT CTCCTTTCTC TACACGCTGC TCACCCATGA CTGCCGCAGC
GCCTGCGAAA GCGTTGGCCT TGATCCCGCC GTCGGCTTCC TGCACCGCGA CCGGCCGGGG
CGGCCGAGCC TCGCGCTGGA TCTGATGGAG GAGTTGCGTC CCGTGCTCAC CGACCGGCTG
GCCCTGTCAC TGATCAACCG CCGCCAGCTC CGAGCAGGCG ACTTCGAGAA GCGCGACGGC
GGCGCCGTGG TCATGAGCGA CGACGCGCGC CGCACCGTCC TCACCGCCTG GCAGGAACGC
AAGAAGGAGG AGCGGCTTCA CCCCTTCCTG CAAGAGAAGG CGCCGCTTGG CCTCGTCCCC
TACCTGCAGG CGCAGATGCT GGCGCGGCAT TTGCGGGGCG ACCTCGACGC CTATCCGCCC
TGGTTCTGGA AGTAG
 
Protein sequence
MKKLLNTVYV TTEGVALRKD GENLVAEVEG EERARVPLHM LASLVVFGPI HISPALMAAC 
AGAGIAIALL DRNGRFRARV EGPVTGNVLL RRAQYRVSEA PEPVVRSILV GKVANQRSVL
MRALRDHREE LEPGDRDAIT AVTERLAFIL RRVERSDGGL DVLRGAEGEA ANLYFSVFDN
LLRVPDPDLR WKGRSRRPPL DPINALLSFL YTLLTHDCRS ACESVGLDPA VGFLHRDRPG
RPSLALDLME ELRPVLTDRL ALSLINRRQL RAGDFEKRDG GAVVMSDDAR RTVLTAWQER
KKEERLHPFL QEKAPLGLVP YLQAQMLARH LRGDLDAYPP WFWK