| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1929 |
|---|
| Symbol | dapA |
|---|
| ID | 3676784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2113111 |
|---|
| End bp | 2114001 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637713493 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_318541 |
|---|
| Protein GI | 75676120 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.712934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGCA GGGCGAAGTT CCAGGGATCA TACACAGCCC TGGTGACGCC ATTCAAAAAC
GGCTCCGTCG ACGAGGCCGC TTTTCGCAGT CTGGTGAGTT GGCAGATCGG CGAAGGAGTT
CACGGGCTGG TGCCGGTCGG CACAACGGGC GAGAGTCCGA CGCTCAGCCA CGATGAACAC
CGCAAGGTCG TGGAATGGTG CATCGAGGAG GCCGGGGGCC GGGTGCCGGT GATCGCGGGC
GCGGGCTCGA ATTCGACCCG CGAGGCGGTC GATCTGGCCT TGCACGCCGA GAAGGCCGGC
GCTGACGCGG TGCTGGTGGT GACGCCGTAT TACAACAAGC CGACCCAGGA AGGCTTGTAC
CAGCACTTCA AGACGGTGAA CGACGCGGTC GGAATTCCCA TCATCATCTA CAACATTCCG
TCGCGCTCGG TCGTCGATCT CTCCGTGGAG ACGATGGCGA GGCTGTTCGA ACTGAAGAAC
ATCGCCGGCG TCAAGGACGC CACCGGCAAT CTGGCTCGGG TCTCATTGCA GCGCCGGGCG
ATGGGCCCCG ACTTCATCCA ACTGTCCGGC GAGGACATGA CGGCGCTCGC CTTCATGGCG
GCGGGCGGAC GCGGCTGCAT CTCCGTCGTC GCGAATGTCG CGCCGAAATT ATGCGCGAGC
CTGATGTCGG CTGTCCTGAA GGGCGATTAT GCCGCCGGGC TCGAAATTCA GGATCGCCTG
GTGCCGCTGC ATGACGCTAT TTTCAAGGAA CCTGGCCTCG CCGGAGCAAA GCATGCGCTC
AAGCTGCTCG GCCGGATCGA CGAAGTCGTG CGGCTGCCGC TGATACCGGT GACCCCGCCG
ACCGGAAAGC TCATCCGTGA GGCCATGGTC CATGCCGGTT TGATAAACTG A
|
|---|
| Protein sequence | MVSRAKFQGS YTALVTPFKN GSVDEAAFRS LVSWQIGEGV HGLVPVGTTG ESPTLSHDEH
RKVVEWCIEE AGGRVPVIAG AGSNSTREAV DLALHAEKAG ADAVLVVTPY YNKPTQEGLY
QHFKTVNDAV GIPIIIYNIP SRSVVDLSVE TMARLFELKN IAGVKDATGN LARVSLQRRA
MGPDFIQLSG EDMTALAFMA AGGRGCISVV ANVAPKLCAS LMSAVLKGDY AAGLEIQDRL
VPLHDAIFKE PGLAGAKHAL KLLGRIDEVV RLPLIPVTPP TGKLIREAMV HAGLIN
|
|---|
| |