Gene Nwi_1928 details

Gene Information

• Locus tag: Nwi_1928
• Symbol: mscL
• ID: 3676783
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter winogradskyi Nb-255
• Kingdom: Bacteria
• Replicon accession: NC_007406
• Strand: -
• Start bp: 2112512
• End bp: 2112931
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637713492
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_318540
• Protein GI: 75676119
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.425698
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTGGAAGG AGTTTCGTGA GTTCGCGATG AAGGGGAATG TCGTCGACCT CGCTGTCGGC 
GTCATCATCG GTGCGGCCTT CGGAGGCATC GTTTCCTCGA TGGTGGCCGA CATCATCATG 
CCGATCGTCG GCGCTGTTAC CGGCGGTCTC GATTTCTCGA ATTACTTCCT GCCGCTTTCT 
GAATCCGTCA ACGCCTCGAA TCTCTCCGAC GCCAAGAAGC AGGGCGCGGT GCTGGCATGG 
GGAAACTTCC TGACGCTGAC GTTGAACTTC CTGATCGTCG CCTTTGTGCT ATTCATGGTC 
ATCAAGGGCA TGAACAGGCT GAAGCGCAAG GACGAGGCGG CATCCGCGGA GCCGCCGAAG 
CCCACGCGCG AGGAAGAGTT GCTGACCGAG ATTCGCGATC TCCTGAAAGC GAAGGTCTAG 

 

Protein sequence

MWKEFREFAM KGNVVDLAVG VIIGAAFGGI VSSMVADIIM PIVGAVTGGL DFSNYFLPLS 
ESVNASNLSD AKKQGAVLAW GNFLTLTLNF LIVAFVLFMV IKGMNRLKRK DEAASAEPPK 
PTREEELLTE IRDLLKAKV