Gene Nwi_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1878 
Symbol 
ID3675334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2061391 
End bp2062029 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID637713439 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_318490 
Protein GI75676069 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.445308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.266783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTTC CCGCGCTGTT CTTCTATCTG TTCGCCGGCG TGTGCGTTGC ATCGGCCGCG 
ATGGTCATCT CGTCGCGCAA TCCGGTGCAC TCGGTGCTGT TTCTCATTCT CGCATTCGTC
AACGCGGCCG GTCTGTTCAT CCTGATGGGG GCGGAATTCC TCGCGATGAT CCTCATCGTG
GTCTATGTCG GCGCGGTCGC GGTGCTGTTC CTCTTCGTGA TCATGATGCT GGACGTGGAC
TTCGCTGAAC TACGCGAGGG CTTTCTCGAA TACCTGCCGT TCGGCCTGGT GATCGCGGCG
ATCTTCCTGC TGGAACTGCT GCTCGTCGTC GGCGGCTGGA CCCTCAATCC GGCCGTCACG
AAATCGATCA CGGCGGCCAT TCCGGGCGAC GTCAGCAATA CCGAGGCGCT CGGCCTCGTG
CTCTACACGA AGTACATTCA TTACTTCCAG CTCGCCGGCA TGGTGCTGCT GGTGGCCATG
ATCGGCGCCA TCGTGCTGAC GCTGCGCCAC AGGGCCGGCG TCAAGCGTCA GGATATCAAC
GTCCAGAACG CCCGGACGCC CGAGATGGCC ATGAGCGTGC GCCAGGTCGC CTCGGGGCAG
GGATTGCAGG ACGCCGACCA GGCGGAGTGG GTGAAATGA
 
Protein sequence
MILPALFFYL FAGVCVASAA MVISSRNPVH SVLFLILAFV NAAGLFILMG AEFLAMILIV 
VYVGAVAVLF LFVIMMLDVD FAELREGFLE YLPFGLVIAA IFLLELLLVV GGWTLNPAVT
KSITAAIPGD VSNTEALGLV LYTKYIHYFQ LAGMVLLVAM IGAIVLTLRH RAGVKRQDIN
VQNARTPEMA MSVRQVASGQ GLQDADQAEW VK