Gene Nwi_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1787 
Symbol 
ID3676824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1956688 
End bp1958286 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content63% 
IMG OID637713348 
Productputative beta (1-6) glucans synthase 
Protein accessionYP_318400 
Protein GI75675979 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG5309] Exo-beta-1,3-glucanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0597936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC TCATCATTTC GCTAGGTCTG ATCGCGGCAG CATGGTGGTG GCTCGGCGCG 
CCGATCCGGC TTGCGCGGGC TCCGATCGAT CCGGCGGCGA AGCTGGAATG CGTGTCCTAT
GCACCGTTCC GGGGGCAACA GACCCCGCTG GTCGCCACGA CCGAGATCGC GCCCGAGCAG
ATCGCCGAAG ATCTTGCCCA GCTGGCGAAG ATATCGAATT GCGTCAGGAC CTACTCGATC
GAGAACGGCC TCGACCGGCT GCCCGCTCTC GCCGAGAAGG TTGGCCTCAA GGTCATCCAG
GGCATCTGGC TTGGCAACAA CCGGTTGAAA AATCTGGCCC AGATCAATGT CGCGATTGGT
CTTGCGAAGG AATATCCCAA CGTCATCACC GCGCTCGTCG TCGGTAACGA GGTTTTGCTG
CGCGGGGAAA TGACCGCCTC CGATCTCGCG GCGAACATCC GGCTGGTGAA GTCGCAGGTG
AAGGTGCCGG TGACCTACGC GGACGTCTGG GAATACTGGC TGCGCAGCCG TGAGGTCTAT
GACGCGGTCG ATTTCGTCAC CATCCACATC CTTCCCTACT GGGAGGATAT TCCGATTCGC
TCGCGTAACG CGGCGGCGCA TGTCGGCGCC ATCCGCAAGC AGGTCGCGGC GTCGTTTCCA
GCCAAGGAGA TCCTGATCGG CGAGACCGGA TGGCCGAGCG CCGGTCGGAT GCGGGAAGGC
GCGCTGCCGT CTCGCGCCAA TCAGGCGCGT GTAGTGTCCG AAATTCTCGA CATGGCGAAA
CGCGAGAAAT TCCGCGTCAA CCTGATCGAG GCCTATGACC AGCCCTGGAA GCGCCAGCTT
GAAGGTACGG TCGGCGGCAA CTGGGGCCTG ATCGGGGTCG ATCCGCGCGA ACTGAAATAT
CCGGCCGGCG AACCCGTTCG CAATTTCCCA TTGTGGAAAA TCCAGATGGG CGCCGGGATG
GGTTTATGCG TCCTTGTCTT CGGGGTCGCC ATGCTGACGT TGCGGCGAAA GCCCTGGAAA
CCGAGATGGA TGTCCTGGAT CGCGGTGGCG GTTTCCGCCA CGACGGCGGG AATCCTGCTC
GGAGTCGCCG CGGACAAGCT GTGTTACGAG AGTTTCGGAC TCGGCAACTC GCTGCGCTGG
GGGGGGCTGC TGGCGGCGGG GGTCATCGCT CCGTTGCTGG GTGCGAACGC CCTGATGTCG
GGGCGCGCGC TGCCGACATT CGTCGAATTG ATAGGCCCGC GCCCGGGTCG CACCGGCTCG
GTGCTGACCG TGATGCTGGG GATAACGCTG CTCGTGACCA CCTTGATCGC GGCGGAGACG
GCGCTCGGCT TCGTCTTCGA TCCACGGTAC CGGGATTTTC CCTTTGCCGC GTTGTCAATG
GCCGTGGCGC CGTGCTGGGC GCTGGCATGG CTCAATCGTC CGCTCACCGG CGTTCGCCCC
ATCGCGGAAT CGGTTTTTGC CGGCCTGCTG ATAATCGCGG CGGTCTATAT CGGATTTAAC
GAAGGCCCGA AGAACTGGCA GTCGCTCTGG ACCTGTGTGG TGTACGCTAT GCTCGGGATC
ACGCTGTGGC GGGCGCGGGC CGCGCAAACC CAAGGATAA
 
Protein sequence
MALLIISLGL IAAAWWWLGA PIRLARAPID PAAKLECVSY APFRGQQTPL VATTEIAPEQ 
IAEDLAQLAK ISNCVRTYSI ENGLDRLPAL AEKVGLKVIQ GIWLGNNRLK NLAQINVAIG
LAKEYPNVIT ALVVGNEVLL RGEMTASDLA ANIRLVKSQV KVPVTYADVW EYWLRSREVY
DAVDFVTIHI LPYWEDIPIR SRNAAAHVGA IRKQVAASFP AKEILIGETG WPSAGRMREG
ALPSRANQAR VVSEILDMAK REKFRVNLIE AYDQPWKRQL EGTVGGNWGL IGVDPRELKY
PAGEPVRNFP LWKIQMGAGM GLCVLVFGVA MLTLRRKPWK PRWMSWIAVA VSATTAGILL
GVAADKLCYE SFGLGNSLRW GGLLAAGVIA PLLGANALMS GRALPTFVEL IGPRPGRTGS
VLTVMLGITL LVTTLIAAET ALGFVFDPRY RDFPFAALSM AVAPCWALAW LNRPLTGVRP
IAESVFAGLL IIAAVYIGFN EGPKNWQSLW TCVVYAMLGI TLWRARAAQT QG