Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1609 |
Symbol | |
ID | 3675346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1756446 |
End bp | 1757099 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637713166 |
Product | cold-shock protein, DNA-binding |
Protein accession | YP_318222 |
Protein GI | 75675801 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0789892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.308571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTCGG ACGGTTTTGA ATCCAGGAAG TTTGCGGGGC CGGCGGTGAG CGATCCCTTG GGATCCAAGG AATTTTCCGG AACGAACGAT CGAGAGGCGG GAGCCGGTCC GTTTGCCGGG CTAGGGGAAT CTCCCGCCAA CATCGTCGAG ATCAGCGGCG TCATCAAATG GTTCGACGCT TCAAAAGGCT ACGGATTTAT CGTCCCCGAT AATGGCTGGC CGGATGTGCT CCTGCACGTC ACGGTGCTTC GTCGCGACGG CTATCAGACC GCTTATGAGG GAGCCCGCCT GGTCTGTGAC TGCGTGCAGC GGGCGAAAGG CTATCAGGCG TTCCGGATCA CGTCGATGGA CGAGTCCACC GCGATTCATC CCGCGCAGAT GCTGCCACCC CGGACACATG TCAGCGTAAC ACCCACCAGC GGCCTGGAGA GGGCGCAGGT CAAATGGTTC AATCGATTGC GGGGATTTGG CTTCTTGACG CGCGGCGAGG GAACTCCGGA TATTTTCGTG CACATGGAAA CGCTACGGCG CTTCGGCATC ACGGAACTTC GGCCGGGGCA GTTCGTCCTG GTCCGCTTCG GGCCGGGTAG CAAGGGCATG ATGGCCGCGG AAGTCCAACC TGAAACGGGT GCCCCCAGCG TGTCCTCGCA CTGA
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Protein sequence | MGSDGFESRK FAGPAVSDPL GSKEFSGTND REAGAGPFAG LGESPANIVE ISGVIKWFDA SKGYGFIVPD NGWPDVLLHV TVLRRDGYQT AYEGARLVCD CVQRAKGYQA FRITSMDEST AIHPAQMLPP RTHVSVTPTS GLERAQVKWF NRLRGFGFLT RGEGTPDIFV HMETLRRFGI TELRPGQFVL VRFGPGSKGM MAAEVQPETG APSVSSH
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