Gene Nwi_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1609 
Symbol 
ID3675346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1756446 
End bp1757099 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID637713166 
Productcold-shock protein, DNA-binding 
Protein accessionYP_318222 
Protein GI75675801 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0789892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.308571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTCGG ACGGTTTTGA ATCCAGGAAG TTTGCGGGGC CGGCGGTGAG CGATCCCTTG 
GGATCCAAGG AATTTTCCGG AACGAACGAT CGAGAGGCGG GAGCCGGTCC GTTTGCCGGG
CTAGGGGAAT CTCCCGCCAA CATCGTCGAG ATCAGCGGCG TCATCAAATG GTTCGACGCT
TCAAAAGGCT ACGGATTTAT CGTCCCCGAT AATGGCTGGC CGGATGTGCT CCTGCACGTC
ACGGTGCTTC GTCGCGACGG CTATCAGACC GCTTATGAGG GAGCCCGCCT GGTCTGTGAC
TGCGTGCAGC GGGCGAAAGG CTATCAGGCG TTCCGGATCA CGTCGATGGA CGAGTCCACC
GCGATTCATC CCGCGCAGAT GCTGCCACCC CGGACACATG TCAGCGTAAC ACCCACCAGC
GGCCTGGAGA GGGCGCAGGT CAAATGGTTC AATCGATTGC GGGGATTTGG CTTCTTGACG
CGCGGCGAGG GAACTCCGGA TATTTTCGTG CACATGGAAA CGCTACGGCG CTTCGGCATC
ACGGAACTTC GGCCGGGGCA GTTCGTCCTG GTCCGCTTCG GGCCGGGTAG CAAGGGCATG
ATGGCCGCGG AAGTCCAACC TGAAACGGGT GCCCCCAGCG TGTCCTCGCA CTGA
 
Protein sequence
MGSDGFESRK FAGPAVSDPL GSKEFSGTND REAGAGPFAG LGESPANIVE ISGVIKWFDA 
SKGYGFIVPD NGWPDVLLHV TVLRRDGYQT AYEGARLVCD CVQRAKGYQA FRITSMDEST
AIHPAQMLPP RTHVSVTPTS GLERAQVKWF NRLRGFGFLT RGEGTPDIFV HMETLRRFGI
TELRPGQFVL VRFGPGSKGM MAAEVQPETG APSVSSH