Gene Nwi_1544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1544 
Symbol 
ID3676372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1689753 
End bp1691027 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content61% 
IMG OID637713099 
ProductPhage portal protein, HK97 
Protein accessionYP_318157 
Protein GI75675736 
COG category[S] Function unknown 
COG ID[COG4695] Phage-related protein 
TIGRFAM ID[TIGR01537] phage portal protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTTT GGTCACGTAT ATTCGGGAGC GGTGCTTCTC CGGAACCGCG CGCCGCGATT 
CAACCGGCGG GCGGCGGCGT TGTCATCACG ACGTCGGAGC AGCTGGAAGA GGCGCTCCGC
ACCGGCAATG TTACCGCGTC CGGCATGACG GTGACACCGG ACAAGGCGAT GCGCGCGTCG
GCGGTGTATG CCTGCGTGCG CATTCGATCG GGCGTTCCGG CCAACATGCC GCTGCATATC
AAGCGTAGGG TGGATGCTCG GACGCGGGAT GACGCTTCCG ATCATCCACT CTGGTCGATC
TTCCGACGCC GGCCTAACCG TTGGCAGACG CCGTCTCAGT TCAAGCGGAT GATGACGGCG
CACCTCTTGC TACGTGGGAA TGCCTACGCG CTAATCGTTC GATCTCGCGG CGCCGTGAAG
GAGTTGATCC CGCTGCACCC CGATCGCGTT AAGTGCGAGC AGCTCGATAG CCTGGCGTTG
GAGTATACCT ACACCCGCAA GGATGGCCGC CGGGTCGTGC TGACTCAGGC CGAGGTCTTT
CACCTCGTTG GTCTGACGCT CGATGGCGTC CATGGCGTCT CCGTCATTAC CTATGCGCGC
GAAACCATCG GCCTATCGCT GGCGCAGGAA GATCATGGCG CGACGGTGTT CAAGTATGGC
GCTCGCCCGT CCACGGTGCT TGTTCACCCG AAAGCGCTAG GCCCGGAGGG CATCGAGAAT
CTACGGTCGA GCCTCGATGA GTTCCGGGCT GGAGGCGATA AGGAGGGCAG GGCGCTGATC
CTCGAAGAGG GGATAGAAGT TAAGCCCCTC GCTATGACGG CCGAAGACGC GCAATGGATC
GAGAGCCGAA AGTTCTCACG TTCCGACATC GCCATGTTCT TCGGCGTACC GCCACACATG
CTTGGCGACA CGGAAAAGAG CACAAGCTGG GGCACCGGCA TCGCATCGCA GACGCAGGGC
TTCGTCACGT TCTGCGCGGA AGACGATCTG ACCACATGGG AAGAGACGAT CAACCGCGAC
CTGATCGTCG ACAATGACAA CGATATCTAC GCCCGGTTCA ATCGGGCGTC GCTGGTCAAG
GGCGACATCA AGATGCGCTG GGAAGCGCAT GTGAAGGCGC TTCAGTGGGG TGTGATGAGT
CCGAATGAGG TTCGTGCGCT CGAAGACCTC AACCCGCGCG AGGGTGGCGA CATCTATTAT
CCGCCTCCGA ATACCGCCGG CGGCGACGAC AAACCCGAAA AGGATGATGG CGATGAGTCT
TCGCAAGCTG CCTGA
 
Protein sequence
MGLWSRIFGS GASPEPRAAI QPAGGGVVIT TSEQLEEALR TGNVTASGMT VTPDKAMRAS 
AVYACVRIRS GVPANMPLHI KRRVDARTRD DASDHPLWSI FRRRPNRWQT PSQFKRMMTA
HLLLRGNAYA LIVRSRGAVK ELIPLHPDRV KCEQLDSLAL EYTYTRKDGR RVVLTQAEVF
HLVGLTLDGV HGVSVITYAR ETIGLSLAQE DHGATVFKYG ARPSTVLVHP KALGPEGIEN
LRSSLDEFRA GGDKEGRALI LEEGIEVKPL AMTAEDAQWI ESRKFSRSDI AMFFGVPPHM
LGDTEKSTSW GTGIASQTQG FVTFCAEDDL TTWEETINRD LIVDNDNDIY ARFNRASLVK
GDIKMRWEAH VKALQWGVMS PNEVRALEDL NPREGGDIYY PPPNTAGGDD KPEKDDGDES
SQAA