| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1535 |
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| Symbol | |
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| ID | 3676560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 1676665 |
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| End bp | 1681884 |
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| Gene Length | 5220 bp |
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| Protein Length | 1739 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637713089 |
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| Product | extracellular alpha-helical protein |
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| Protein accession | YP_318148 |
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| Protein GI | 75675727 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.232844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.84967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGGC TGGTTCGTGC CGTAGCCTTT TGCGCGACCT TGCTCATCGG GCTGGGATCG
GTCGCCCATG CGGCGGATAA AGCTTTCAAG CGCGACGATC TGGCCGATGC GGCGATCAAG
CTCGAAGCCC GGATCAAAAG TGAAGCCGGC GCGGTCGCCA AATCAGGCTC CATGCTGCGT
ACCGACGCCG ACACGGCCTT CAAACGAGCC GATTTTCGCA GTGGCCTTCA AATACTCGGC
CAGATCGCAA CCGTTGCACC GAACGATAGC GGCAACTGGC TACGCCTGGC GCGGACCATC
TTCCAGATCA AACCCGCCAC AAGTCAGGAA CAGACCTTCC TGCTGGAGCG CGCGTCCACC
GCTGCCTATC TCGCCTACCA GCGGGCGACC GATCCGGGGA CCGAGGCTGA TGCATTGGCG
GTTCTCGGTC GCGCCTTTTC GGATCGAAAG CTGTGGCGGC CGGCCCTCGA CGCGTTGCGG
CTCTCTCTCG ATCTGCGCGA AGTGGCCAGC GTTCGCGAGC AATACGAAAA AATGCGGGAC
GACCACGGCT TCCGGCTGCT CGATTACACG GTAGATTCGG ATTCGGCGAC GCCTCGGGTC
TGTTTTCAGT TCTCCGAGGA TCTTGCCAAG AGGGTGGACT TCTCGCCCTT CGTCGCGCTC
GCGGGAGACG ACCGGCCGGC GCTGTCCTCG GAGGACAGGC AACTTTGTGT CGAGGGTCTC
AAGCACGGTG AGCGCTACAA TATCAACCTG CGCGCCGGCC TGCCGTCGGC CGTGAAGGAA
AGTCTGCCGA AATCCGCTGA ATTCAACGTC TATGTGCGCG ACCGCAAGCC GTTCGTCCGC
TTCACCGGAC GAGCCTACGT GCTGCCGCGC ACCGGCCAGC GCGGCATCCC GCTTGTCAGC
GTCAACACCC AGAACGTGAC CGTCAAGGTG TTCCGGATCG GCGACCGCAA CCTCATCAAC
ACCGTTGTCG AGAGCGACTT TCAGAAGGCG CTCGGCAGCC ATCAGTTATA TGAGCTTGGC
CACGAACGCG GGATCAAGGT CTGGTCGGGC GAGGTGACGA CGGCCTCCAC CCTGAATGCC
GATGTGACGA CGGCGTTTCC GGTCGATGAG GCGCTCGGAA ACCTCCAGCC CGGCGTTTAC
GTGATGACGG CCGCGCCCAA GGGTCCGGGT TCGACGGATG ACGACGAGTC CGGCTCGCTG
GCGACCCAGT GGTTCATCGT CTCGGACCTC GGCCTGAGCG CCTATTCAGG CAATGACGGC
ATCCACGTCT TCGTCAATTC GCTGGCGACA ACCGATGCCG TGGACAAGGC GGAAGTCCGC
CTGGTCGCCC GCAACAATGA AATCCTGGCA ACCCGGAAGA CGGATGCATC CGGGCACGCG
CTATTCGAGC CGGGGCTGGC GCGAGGCGAA GGAGGGCAGT CGCCCGCGTT GCTGACAGTC
AGCACCGACA AAGCCGATTA TGCGTTCCTC AGCCTGAAGT CGAATGCATT CGATCTGACC
GATCGCGGCG TCTCGGGCCG CGCCGTGCCA TCGGGAGCCG ATGCCTTCGT TTATGCGGAG
CGCGGCGTCT ATCGCTCGGG GGAGACCGTG TATCTCACGG CGTTGCTGCG GGACGGGCAG
GGCGTCGCCG TGACCGGCGG CCCCCTGACG CTGGTGGTCG AACGGCCTGA TGGCGTCGAG
TACCGCCGCG CAGTCCTGTC GGATCATGGC TCGGGCGGAC GAAGCCTGGA CCTGCCGCTC
AATTCAGCGG TCCCGACCGG AACATGGCGG GTTCGCGCGT TTACGGACCC CAAAGGACCA
TCCGTCGGCG AAACCACCTT CATGGTCGAG GACTATGTCC CGGACCGGAT CGAATTCGAT
CTGACTACCA AGGCGAAACA GATTGCCGCT GATAATCCGG TAGAACTCAA GGTCGACGGC
CGTTTCCTCT ACGGCGCTCC CGCGTCCGGC CTGCAGCTCG AAGGCGAGTT ACTGGTTGCG
CCTGCCGAGA GCCGTCCAGG CTATGCGGGG TATCGGTTCG GCGTGCCCGA TGACGAGGCC
GCCAGTAACG AGCGCACACC GATCGAAAAC CTGCCCGAAG CCGATGCGAA CGGCGTCGCC
ACGTTTCCCG TCAGCCTCGC GACGGCCCCG TCATCGGACC GGCAGCACGA AGCGCAGATT
TTCATTCGCA TGGCGGAGGC GGGCGGCCGC GCGGTCGAAC GGAAGATCGT GCTTCCGGTG
AAACCGTCCG CCGCCATGAT CGGCGTCAAA CCGTTGTTCG CCGACAAGAG TGTCGCGGAG
GGGGACAGGG CCAGATTCGA CGTCGTCTTT GTGGCGCCGG ACGGAACGTC GCTTGCCCGC
AAGGGTCTGC GCTACGAACT GCTCAAGCTG GAGAGCCGCT ATCAGTGGTA TCGGCAGAAC
TCGTACTGGG AATACGAGCC GGTGAAATCG ACCAGACGGG TGGCCGATGG CGACCTCTCG
ATCGCCGCCG ACAGTCCCGC GCGGATCGAA CTCTCCCCGC AGCCGGGGCG TTACCGGCTC
GACGTCAAAT CCTCCGATTC AGACGGCCCG CTGACATCTG TTCAGTTCGA CGTCGGCTGG
TATTCCGACG GCAGCGCCGA CACGCCTGAC CTGCTGGAAA CCTCGATCGA CAAGCCGGAT
TACCAGTCCG GCGACACCAT GGTCGTTTCG GTTAACGCCC GGACCGCGGG CAAGCTCACG
ATCAACGTTC TAGGTGACCG GCTGCTGACC ACCCAAACCA CCGAGGTCAA GGAAGGCACG
TCGCAGGTCA AGATCCCGGT CGGCAAGGAC TGGGGCACCG GGGCCTATGT GGTCGCGACG
CTGCGGCGGC CGCTCGACGT TGCCGCGCAG CGGATGCCCG GCCGCGCGAT CGGCATCAAA
TGGTTCGGCA TCGACAGGAG CGCGCGCACC CTTTCGGTCA ACCTCTCGCC GCCGGAACTG
GCGCGACCAT CCGCACCGCT TAAGCTGCCT GTGAAGGTCG GCGGTCTAAG CCCCGGCGAA
GACGCCAAGA TCGTCGTCGC CGCCGTTGAC GTCGGCATCC TCAATCTCAC CAACTACAAA
CCGCCAGCGC CCGACGACTA CTATCTGGGC CAGCGTCGCT TGACGTCTGA AATCCGTGAT
CTCTACGGAC AACTGATCGA CGGGATGCAA GGGACGCGCG GCCAGCTCAG GACCGGCGGC
GATTTCGCGG GAGCGGAGTT GCAGGGCAGC CCGCCGACGC AGAAGCCGCT CGCGCTCTAT
TCGGGCATCG TCACGGTCGC CGCGGACGGC ACGGCCGAAA TCAGCTTCGA CATTCCGGAG
TTCGCGGGCA CGGCGCGCGT GATGGCGGTC GCCTGGACCG CGACCAAGCT CGGGCGTGCG
ACGGTCGATG TCACGGTGCG TGATCCGGTG GTGCTGACGG CGACCCTGCC GCGCTTTCTG
TTGACCGGCG ATCGGGGCAC GATGAGCTTC GATCTCGACA ATGTCGAAGG TCCGCCAGGA
GATTATACCG TCAACGTCAG AACGTCCGGG CCGGTGAAGG TAGCGGGCAA TGCCACGACC
GCGATCAAGC TCGCGGCCGG GCAGCGCAGT TCGATGGCGC TGACGCTCGA TACCGCGGGC
TCCGCCGGCG CTGCCCGGTT CGACATCGAT ATCAAGGGAC CGAACGGCCT GAGGCTGGCG
CGGCATTACG ACCTCGAGGT TAAGCCCGCG ACACAGATCC TGGCGCGTCG CTCTGTGCGA
ACGCTGGCGA AGGGCGAGAG CCTGACGCTG ACCTCGGATA TGTTCTCGGA CCTCGTGGCG
GGCACGGGAG GGGTGTCGAT GTCGGTCGGC CTGTCCTCGG CGCTGGACGC GGCGAGCGTC
CTTAAGGCGC TCGACCGTTA TCCGTTCGGC TGCTCGGAGC AGATCGCAAG CCGGGCGATG
CCGCTGCTCT ACGTCAATGA TCTCGCAGCG GAAGCCCACC TCGCGATGGA TACCAGTATC
GACGATCGCA TCAAAAGCTC GATCGAGCGG CTGCTGGCAA GGCAGGGCTC GAATGGTTCC
TTCGGCCTGT GGTCGTCCGG CGGCGAGGAT TCCTGGCTCG ACGCCTACGT CACGGACTTC
CTGACGCGCG CTCGCGAGAA GGGCTTCTCC GTCCCCGACA TTCAGTTCAC GAGCGCGCTC
GACCGCATCC GCAACTCGGT GGTGAACGCA GCCGAGCCGG AAAAGGACGG CGGTCGCGAC
CTGGCTTACG GGCTTTACGT TCTCGCCAGG AACGGCGCCG CCCCGATCGG CGATTTGCGT
TATCTGGCCG ATACCAAGTT GAACAATCTG GCGACGCCGA TCGCCAAGGC GCAACTTGCC
GCGGCGCTCG CGCTGGTCGG CGACCGGGCG CGCGCTGAAC GTGTTTATAT TGCTGCGGCT
GAAAGCCTTG CGCCGAAACC GGCACTCGAA TTCGGCCGGG CGGACTACGG CTCGGCGCTC
CGCGATGCGG CAGCGCTGGT ATCGCTGGCG AGCGAGGGCA ACGCGCCGCG AGCCACGGTC
ACCCAAGCGG TGCAGCGGGT GGAAGCGGCG CGGGGGCTGA CGTCCTCAAC CTCGACGCAG
GAGAACGCGT GGCTGGTCCT GGCGGCGAGG GCGCTTGCGA AAGAATCAAT GTCGCTCGAT
GTCAACGGCG CGCCCGTTAA AGCCGCGCTT TATCGCAGCC ACAAGGCGGC CGAGCTGGCC
GACAAGCCGA TCAAGATCAC CAACACAGGC GAAGCGCCGG TGCAGGCGGT GATCTCCGTG
GCCGGCGCGC CGGTTACTCC CGAACCGGCG ACCTCGAACG GCTTCGTAAT CGAGCGCAAC
TATTTCAACC TCGACGGAAC GCCCGCGGAT CCGACCCAGG CCACGCAGAA CGACCGCTTG
GCGGTCGTTC TCAGGATCAC TGAAACGAAG CCTGAATACG GTCATATCCT GGTGGCGGAC
TATCTTCCGG CAGGATTCGA GATCGACAAT CCTAATCTGG TATCCTCCGG GGACACCGGG
ACGCTCGACT GGATCGAGGA CGGCAAGGAG CCGGTCAGCA CTGAATTCCG TGACGACCGC
TTCACCGCCG CCATCGATCG CACTGCGAGC GACAAGGCGG TATTCACCGT GGCCTATGTC
GTGCGCGCGG TGTCGCCCGG AAAATACGTG CTGCCGCAGG CATACGTGGA AGACATGTAC
AATCCCTCGC GCTACGGCCG CACCAGCACC GGCCGCGTCG AGGTGCGTTC AACAAAATGA
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| Protein sequence | MTRLVRAVAF CATLLIGLGS VAHAADKAFK RDDLADAAIK LEARIKSEAG AVAKSGSMLR
TDADTAFKRA DFRSGLQILG QIATVAPNDS GNWLRLARTI FQIKPATSQE QTFLLERAST
AAYLAYQRAT DPGTEADALA VLGRAFSDRK LWRPALDALR LSLDLREVAS VREQYEKMRD
DHGFRLLDYT VDSDSATPRV CFQFSEDLAK RVDFSPFVAL AGDDRPALSS EDRQLCVEGL
KHGERYNINL RAGLPSAVKE SLPKSAEFNV YVRDRKPFVR FTGRAYVLPR TGQRGIPLVS
VNTQNVTVKV FRIGDRNLIN TVVESDFQKA LGSHQLYELG HERGIKVWSG EVTTASTLNA
DVTTAFPVDE ALGNLQPGVY VMTAAPKGPG STDDDESGSL ATQWFIVSDL GLSAYSGNDG
IHVFVNSLAT TDAVDKAEVR LVARNNEILA TRKTDASGHA LFEPGLARGE GGQSPALLTV
STDKADYAFL SLKSNAFDLT DRGVSGRAVP SGADAFVYAE RGVYRSGETV YLTALLRDGQ
GVAVTGGPLT LVVERPDGVE YRRAVLSDHG SGGRSLDLPL NSAVPTGTWR VRAFTDPKGP
SVGETTFMVE DYVPDRIEFD LTTKAKQIAA DNPVELKVDG RFLYGAPASG LQLEGELLVA
PAESRPGYAG YRFGVPDDEA ASNERTPIEN LPEADANGVA TFPVSLATAP SSDRQHEAQI
FIRMAEAGGR AVERKIVLPV KPSAAMIGVK PLFADKSVAE GDRARFDVVF VAPDGTSLAR
KGLRYELLKL ESRYQWYRQN SYWEYEPVKS TRRVADGDLS IAADSPARIE LSPQPGRYRL
DVKSSDSDGP LTSVQFDVGW YSDGSADTPD LLETSIDKPD YQSGDTMVVS VNARTAGKLT
INVLGDRLLT TQTTEVKEGT SQVKIPVGKD WGTGAYVVAT LRRPLDVAAQ RMPGRAIGIK
WFGIDRSART LSVNLSPPEL ARPSAPLKLP VKVGGLSPGE DAKIVVAAVD VGILNLTNYK
PPAPDDYYLG QRRLTSEIRD LYGQLIDGMQ GTRGQLRTGG DFAGAELQGS PPTQKPLALY
SGIVTVAADG TAEISFDIPE FAGTARVMAV AWTATKLGRA TVDVTVRDPV VLTATLPRFL
LTGDRGTMSF DLDNVEGPPG DYTVNVRTSG PVKVAGNATT AIKLAAGQRS SMALTLDTAG
SAGAARFDID IKGPNGLRLA RHYDLEVKPA TQILARRSVR TLAKGESLTL TSDMFSDLVA
GTGGVSMSVG LSSALDAASV LKALDRYPFG CSEQIASRAM PLLYVNDLAA EAHLAMDTSI
DDRIKSSIER LLARQGSNGS FGLWSSGGED SWLDAYVTDF LTRAREKGFS VPDIQFTSAL
DRIRNSVVNA AEPEKDGGRD LAYGLYVLAR NGAAPIGDLR YLADTKLNNL ATPIAKAQLA
AALALVGDRA RAERVYIAAA ESLAPKPALE FGRADYGSAL RDAAALVSLA SEGNAPRATV
TQAVQRVEAA RGLTSSTSTQ ENAWLVLAAR ALAKESMSLD VNGAPVKAAL YRSHKAAELA
DKPIKITNTG EAPVQAVISV AGAPVTPEPA TSNGFVIERN YFNLDGTPAD PTQATQNDRL
AVVLRITETK PEYGHILVAD YLPAGFEIDN PNLVSSGDTG TLDWIEDGKE PVSTEFRDDR
FTAAIDRTAS DKAVFTVAYV VRAVSPGKYV LPQAYVEDMY NPSRYGRTST GRVEVRSTK
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