Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1524 |
Symbol | |
ID | 3676549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 1662411 |
End bp | 1663895 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637713078 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_318137 |
Protein GI | 75675716 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.205747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCTC CCGCCGCCAG GGCTTTGGGC CATCCTCTGA GACGCGCGAC ATGGATCCGG CGTTCCGCGA TGCTCCTGCC GCTATGGGCG GCGGTCGCGG CGTCGGCCGG CTGCATTCTG ACACGGGATA TTCCGGATCC GGCGCTGGAT ATTCCGATGG CGTACAAGGC CGCGAGCACG ACCGCGGCTG ACGCCCTGCC GGCGCTCGAC TGGTGGCGCG GCTTTCGCTC GTCCGAACTC ACCTCCCTGA TGGAAGAGGC CCAGACCGTC AATCTCGATA TCGCAGCGGC GGCCGCGAGG ATCATTCAGG CCGACCGGCA GGCCCGGATC ATCGGCGCGG CGCTATTGCC GAGCGTCAGC ATCGGCGGGC AGGAATCCTA TTTCCGCACG TCGGGTTCGA GCCAAAGCGG CCTGACCAAT CGTGGCCGGG AAGTCGTGAA CTACTCGGGC ACGTTGAGCG GCGCCAGCTA TGAGCTCGAT TTCTGGGGCA AGAACCGCGA TGCCACGCTG GCCGCGCTGG AGACGGCCAA CGCCAGCCGC TTTGACCGCG ACGTGGTCGC GCTGACGACG CTGGTCAGCG TCGCGAATGC CTATTTCCAG GTCCTCACGG CGCAGGACCG CATTCGCACC GCCGAACGCA ACATCGCCAG CGCCCGGCGT ATTCTGGACG CGCTCAAACA GCGGCTGAGC GCCGGCACCG GATCCGACCT CGACGTTGCG CAGCAGGAGA GCGTGCTGGC AAATCTGCGC GCGACCGTTC CGCAACTCAG GCAGACGCTG GTACAGAACA TCAACGCGCT CGCGACGCTG GTGGCTCGCC CGCCGGAAAG CGTGACCGTG AAGGGCGGTT CGCTCAACCG CATCACCGCG CCAAGGGTGA CGCCCGGGCT GCCGTCCGAA TTGCTGACCC AGCGCCCGGA CATCCGCCGT CAGGAGCTGC AGCTCGCCTC GGCGACCGCG AATGTCGGTA GCGCGCGGGC ACAGTTCTTT CCAAGCATTC AGTTGACCGC GCAGGGCGGC TACCAGAGCC CGGCGCTGGT CGCGCTGTTC GCCCCCAATG CCGCATTCTT CAACCTCGCC GGCGCACTGA CGCAGCCGAT CTTCGATGGC CGCAGGATCC TCAGCAATTT CGAACTCACG AAGGCGAGGC AGGACGAACT GCTTCAGACT TACCGCAAGA CGGTGATCTC GGCGTTCGCC GATGTCGGCA ACGCGCTGAC TGCCGTGCGT CAAACCACCG AGCGGCTGCG CCTCCAGCGT GAGGTCGTGG CCGCTTCGCG CAAAGCGTTC CAGCTCTCCG AACAACAGCT ACAGGCCGGT ACCGCCGACA TCATCATCGT GCTGAACACG CAATTGACGC TTTTTCAGGC GGAAGATGTC CTGTCGCAAG CGCAGCTTGC ACGGTTACAG GCGATCGTGA GTCTTTATCA GGCCCTGGGC GGCGGCTGGG AGCCGCGGAT CGAGAGGGCG GGCAATGCTC TTTAG
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Protein sequence | MSAPAARALG HPLRRATWIR RSAMLLPLWA AVAASAGCIL TRDIPDPALD IPMAYKAAST TAADALPALD WWRGFRSSEL TSLMEEAQTV NLDIAAAAAR IIQADRQARI IGAALLPSVS IGGQESYFRT SGSSQSGLTN RGREVVNYSG TLSGASYELD FWGKNRDATL AALETANASR FDRDVVALTT LVSVANAYFQ VLTAQDRIRT AERNIASARR ILDALKQRLS AGTGSDLDVA QQESVLANLR ATVPQLRQTL VQNINALATL VARPPESVTV KGGSLNRITA PRVTPGLPSE LLTQRPDIRR QELQLASATA NVGSARAQFF PSIQLTAQGG YQSPALVALF APNAAFFNLA GALTQPIFDG RRILSNFELT KARQDELLQT YRKTVISAFA DVGNALTAVR QTTERLRLQR EVVAASRKAF QLSEQQLQAG TADIIIVLNT QLTLFQAEDV LSQAQLARLQ AIVSLYQALG GGWEPRIERA GNAL
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