Gene Nwi_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1485 
Symbol 
ID3674205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1612790 
End bp1613989 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content60% 
IMG OID637713037 
ProductPhage portal protein, HK97 
Protein accessionYP_318098 
Protein GI75675677 
COG category[S] Function unknown 
COG ID[COG4695] Phage-related protein 
TIGRFAM ID[TIGR01537] phage portal protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.334021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTACCTTG AGCAGGCAAC TTTGAAACTC TGGCCCTTCA GCCGCACTAC TGTCGAAACG 
AAATCGCTCA GCGATCCGGA TGAAGCGATC GTCGCAATTC TCTCGGGCGG CAGCACGTAC
GGGCCGGTTC ATCCGCTTTC AGAACCCGCT GTTTCCGCCG CCGTCACGAC AATTAGCAAT
GCTGCGGCAA CGCTCGATCT ACACCTGGTC AAACGCGATG ACACGTCCGC CGACGTAAAG
CACCCTGCAC TCGATCTGTT GCGCGGCCAC GTCAACGAGT GGACCTCCGG CTCCGTCCTG
ATCCGCGATT TGATCGCACA AGCATTGACC GCCGACGCGG GCGGGATTGC CTGGGTCAAT
AAATCCAGCG ACGGTCGCCC CCTTGAAATC ATCCGCTACA GCGCGGGCCG CATCACCGTG
GAATATGCCG GCGACGGCTC CGGTCGCCCG TCCTACACCG TCAACGGTCG CAGCGTGCCG
GCATCGGACA TCATTCACAT TCGCGGGCCA TTCTCGAAAT GCCCGGTTAG CCTCGCGTAT
CCGACAATCT CCGCCGCAGT GGCGATGTCG CGCTACGTCG AATTCCTATT CAAGCGGATG
GCGCGCCCCG GTGGCGTAGT CGAGGTACCG TCCGGCGCGG GCGAAAAGGC TGTCCAGAAC
ATGATCGCTG GCTGGAACGC GGCGTATGGC GGCCCGGACA ATGCGGGTGG TACGGCGTTT
CTATTCGATG GCGCGACATT CAAGCAGATT GCGCTCGCAT CGACCGACGC TCAGTTCGTT
GAAAACCGCC GTTGGCAATT GGAAGACATC GCACGCGCTT TCAACATTAG CAGCGTCATG
CTCGGTGACC TCGCAAAATC GAGCTACGCC AACGCATGGC AAAAATACAG AGAGTTCCTG
AGCGTCACGC TGATGCCGTG GCTCAAGGCG CTTGAATCTG CGTTCGACCG CGCGCTGCTG
ACTGATGACG AGCGGGCGCT GTACGCGTTC AAGTTCGACA TTGATGACCT GACACGCGTG
GACCTGGAGA AGCGTGCGAC CGCCATTTCC AGCCTCGTTG CCAGTCGCGT GCTCAATCCA
AACGAAGCCC GCACATGGCT GGATACCGGC CTTGCGCCTT ATGCCGGCGG CAACGAATTT
GCCAACCCGA ACACCGGCGC CAGCCAGCCT GGATCGCAGG AGCAGCCCGT AAATGACTGA
 
Protein sequence
MYLEQATLKL WPFSRTTVET KSLSDPDEAI VAILSGGSTY GPVHPLSEPA VSAAVTTISN 
AAATLDLHLV KRDDTSADVK HPALDLLRGH VNEWTSGSVL IRDLIAQALT ADAGGIAWVN
KSSDGRPLEI IRYSAGRITV EYAGDGSGRP SYTVNGRSVP ASDIIHIRGP FSKCPVSLAY
PTISAAVAMS RYVEFLFKRM ARPGGVVEVP SGAGEKAVQN MIAGWNAAYG GPDNAGGTAF
LFDGATFKQI ALASTDAQFV ENRRWQLEDI ARAFNISSVM LGDLAKSSYA NAWQKYREFL
SVTLMPWLKA LESAFDRALL TDDERALYAF KFDIDDLTRV DLEKRATAIS SLVASRVLNP
NEARTWLDTG LAPYAGGNEF ANPNTGASQP GSQEQPVND