Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1449 |
Symbol | hfq |
ID | 3675188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1579848 |
End bp | 1580096 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637713001 |
Product | RNA-binding protein Hfq |
Protein accession | YP_318062 |
Protein GI | 75675641 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.083877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATAG ACCGCGCACA AAACCTACAG GACACTTTCC TCAACCACGT CCGTAAGACG AAAACGCCTC TGACGATCTT TCTGGTAAAC GGAGTCAAGC TCCAGGGAAT CGTGACCTGG TTCGACAATT TCTGCCTGCT GCTCAGGCGC GACGGTCATT CACAACTGGT CTACAAACAC GCGATTTCGA CCATCATGCC GGGTGCTCCG ATCCAGTTGT TTGAAGGCGG CGAGGATGCT CCGCTTTGA
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Protein sequence | MAIDRAQNLQ DTFLNHVRKT KTPLTIFLVN GVKLQGIVTW FDNFCLLLRR DGHSQLVYKH AISTIMPGAP IQLFEGGEDA PL
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