Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1423 |
Symbol | |
ID | 3675251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1549906 |
End bp | 1551048 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637712975 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_318036 |
Protein GI | 75675615 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.371346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.777047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCGG CTTCGCTGCC GTCGCGGAAA AGAACTATAG CGTTTTCGAG CGAAGCGGAA TCCGGTTCGC GTCAAGAAAA CGCGTCAAAA CATAAAGATA AAGTCTTTCA CCATTTCCAT AAAACGGTGA AAGACTCTGG TATCGCCCAG CGCCTGTCGG GTCGCATACG CTGCGCATTG GCTGCGTTTC TGATTGTCGT GGTGCCCGGT CCGGCCTCTG CGCAAGTGGG CGCGGAGACG GCGGCCGCCC CCGAACACGC CAAACCGGAT AAGACAGACA AGCCCGATAA AGCAGTCGAG CCGGATAAGG TAGACAAGTC CGACAAGGTC GATCTCGACA CACGCGAGGC GATCTGCCTG ATGGTCGAAT CCGCGGCCAG GGCCGAGAGC TTACCGCTGG AGTTTTTCGC GCGCGTGATC TGGCAGGAGA GCCGGTTTCA GCCCGATGCG GTGGGACCCA TGACGCGCAG CGGTCAGCAT GCGCAGGGTA TCGCGCAGTT CATGCCGGGG ACGGCGAACG AGCGACGGCT GCTTGATCCT TTCGATCCGG TGCAGGCCCT GCCCAAGTCG GCGGAATATC TGAACGAGCT GCGTGGGCGC TTCGGCAATC TGGGACTGGC GGCCGCGGCC TATAACGCCG GTCCTCGCCG TTTGCAGGAC TGGCTTGATG GCAAGGGATC GATGCCCGCC GAGACGCGCA ACTATGTTGT CGCCATCACG GGATCGCCCA TCGAGGACTG GGCGGCCGCC GGCAAGAGCG GGAAACCGCC AGCCCCTTCA GACACGACGA GTTGCCGCGA ACTGATGGCG TTGTTGAAAC GGGCACCCAA TCCGTTTGTC ACGGGCCTCG AACAGCACGT CAAGCTCGGT GCGGACAAGC CGTGGGGGGT ACAGCTCGCG GCGGGCTTCA ACCGCGCCGG CGCGATGGCG ATGTACGCAC GAGCCATTAG ACACCTTGGC GCTGTGATCG GCGATCGCGA TCCGAGCCTG CTGGGCTCGC TATGGCGCAG TCGTGGCACG CGGACATTCT ATCAGGTGCG GATCGGGGCC GATTCGCGTA TGGAGGCCGA CGATCTCTGC AACCGGATCC GGCGCGCTGG CGGCGCCTGC CTCGTGCTGC GAAACCCGCG CGTGAAAGGG TAG
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Protein sequence | MHPASLPSRK RTIAFSSEAE SGSRQENASK HKDKVFHHFH KTVKDSGIAQ RLSGRIRCAL AAFLIVVVPG PASAQVGAET AAAPEHAKPD KTDKPDKAVE PDKVDKSDKV DLDTREAICL MVESAARAES LPLEFFARVI WQESRFQPDA VGPMTRSGQH AQGIAQFMPG TANERRLLDP FDPVQALPKS AEYLNELRGR FGNLGLAAAA YNAGPRRLQD WLDGKGSMPA ETRNYVVAIT GSPIEDWAAA GKSGKPPAPS DTTSCRELMA LLKRAPNPFV TGLEQHVKLG ADKPWGVQLA AGFNRAGAMA MYARAIRHLG AVIGDRDPSL LGSLWRSRGT RTFYQVRIGA DSRMEADDLC NRIRRAGGAC LVLRNPRVKG
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