Gene Nwi_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1380 
SymbolrplR 
ID3677159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1507644 
End bp1508006 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content62% 
IMG OID637712931 
Product50S ribosomal protein L18 
Protein accessionYP_317993 
Protein GI75675572 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.794975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAC TGAAGATTAC GAATGCCCGG CGCAAGCAAC GCGTGAGGCT GTCGTTGCGT 
CGGATTGCAA ATGGCCGTCC GCGGCTGTCG GTGTTCCGCT CGTCGAAGCA CATCTATGCC
CAGGTCATTG ACGACCTGAA AGGCGAGACG CTGGCCTCGG CATCCTCGCT GGAGAAGGCG
ATGCGCGACG CAGGGAACAC GGGCGCCGAC ATCGATGCGG CCAAGGCCGT CGGCAAGCTT
GTGGCGGAGC GGGCGGTGAA GAACGGCGTC AAGGAAGTTG TTTTCGATCG CGGCGGCTAT
CTCTATCACG GTCGCGTCAA GGCGCTGGCC GATGCCGCTC GCGAGAGCGG ATTGAGCTTC
TAA
 
Protein sequence
MSKLKITNAR RKQRVRLSLR RIANGRPRLS VFRSSKHIYA QVIDDLKGET LASASSLEKA 
MRDAGNTGAD IDAAKAVGKL VAERAVKNGV KEVVFDRGGY LYHGRVKALA DAARESGLSF