Gene Nwi_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1233 
Symbol 
ID3674458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1356230 
End bp1358188 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content64% 
IMG OID637712783 
ProductABC transporter, transmembrane region 
Protein accessionYP_317847 
Protein GI75675426 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG CGGCTTTCCC TCAGGCGACC GCGCCGGCAA AGCCATCAGA TGACCCCACC 
CGGAACGCGA CCCTCGGCAG GGCGCTCTTG CATCTGTGGC CCTACATGTG GCCCGGTGAC
CGCGCCGACC TGAAAATGCG CGTGGCATGG TCGCTGGTGC TGTTGCTTGC GGCAAAAGTC
GCAACTCTGG TCGTTCCCTT CACGTTCAAA TGGGCGGTCG ATGCGCTGGG CGGCACGGGA
AGCGCGCCCG TGCAGCCCGA CAACTGGGCG ATGTGGCTGA TCGTGTCGCC GCTCGCGATG
ACGCTGGCCT ACGGCTCCGC CCGCGTGCTG ATGGCGCTGC TGACGCAATG GCGCGACGGC
ACTTTCGCCA AGGTCGCGAT GCACGCGGTG CGCAGGCTGG CTTACCGGAC GTTCGTCCAC
ATGCACGAGC TGTCGCTGCG TTTTCATCTC GAACGCAAGA CCGGCGGATT GACGCGCGTG
CTCGAGCGGG GCCGCAACGG CATCGAAGAG ATGGTGCGGC TGGTCATCCT TCAGCTCATT
CCGACGGCGG TCGAGGTCGG ATTGCTCACC GCCGTGCTGC TTTGGCAGTT CGACTGGCGC
TATGTTCTGG TGACGCTGCT GACCGTCATG GTCTACATGG CCTTCACCTA CAAAGCGACG
CAGTGGCGTA TCGAGATCCG CCGCCGGATG AACGACTCCG ATTCCGACGC CAACACCAAG
GCGATCGATT CGCTTTTGAA CTATGAGACG GTCAAGTATT TCAGCGCCGA GACGCGTGAA
GCGGATCGCT ATGACCGCTC GATGGAGCGC TTCGAGACCG CAAGCGTGCA GACCTACACA
TCGCTGGCGG TGCTGAATGC GGGGCAGGCC GTGATCTACA CCGCCGGCCT GACGACGGTC
ATGATCATGT GCGCGATCGG GGTCCGAAAC GGGACCCACA CCGTCGGCGA TTTCGTCATG
GTCAACGCCA TGATGATCCA GCTCTACCAG CCGCTCAATC TCATGGGCAT GGTCTACCGC
GAGATCAAGC AGGCGATCAT CGATATCGAG AAGATGTTCT CCGTGCTGAC CCGCCGCGCG
GAGGTCCAGG ATCGCCCCGG CGCGCAGCCG CTGCGCGTCG AGAGCGGGGC GGTGAAGTTT
GAGGATGTGC TGTTCGCCTA CGATCCGGAT CGCCCGATCC TCAAGGGCCT GACTTTCGAT
GTGCCGGCGG GAAAGACGGT GGCCATCGTC GGCCCTTCGG GAGCCGGAAA ATCGACGCTG
TCCCGGCTGC TGTTCCGCCT TTATGACGTC TCCAGCGGCC GCATCCTGAT CGACGGCCAG
GATATCCGCG ATGTGACTCA GGAGTCGTTG CGCGCGGCGA TCGGAATGGT GCCGCAGGAT
ACCGTGCTGT TCAACGATAC CATCCGCTAC AACATCCGTT ATGGCCGCTG GGACGCCACC
GACGAGGAGG TCGAGGCGGC CGCGCGGACG GCGCAGATCG ACGGCTTCAT CAGGATGTCG
CCTAAAGGGT ATGAGACGGA GGTCGGCGAG CGCGGATTGA AACTGTCCGG CGGCGAGAAG
CAGCGCGTGG CGATCGCGCG CACCGTGCTG AAGGCGCCCC CTATCCTCGT ACTGGATGAG
GCGACGTCGG CGCTCGACAG CCACACCGAG CATGAAATCC AGGAGGCTCT CGAACGGGTC
TCGCGCAACC GGACGTCGCT GGTGATCGCG CACCGGCTCT CGACCATTGT CGGCGCCGAC
GAAATCATCG TGCTCGACCA GGGACGTATC GCCGAACGCG GGACTCACGC CGAGCTTCTG
GCGGCGGGGG GTCTTTACGC GAGCATGTGG AACAGGCAAC GAGAGGCCGA GGAGGCGCGA
GAGAAGCTTG CGCTGATCGG CGATGAAGAG GGCGCGCCGA ATCGCGCCCC TCCGCCTGTG
GACGATCCGC TGGTGGCGCC AACCGGCGCG GCAGGGTAG
 
Protein sequence
MADAAFPQAT APAKPSDDPT RNATLGRALL HLWPYMWPGD RADLKMRVAW SLVLLLAAKV 
ATLVVPFTFK WAVDALGGTG SAPVQPDNWA MWLIVSPLAM TLAYGSARVL MALLTQWRDG
TFAKVAMHAV RRLAYRTFVH MHELSLRFHL ERKTGGLTRV LERGRNGIEE MVRLVILQLI
PTAVEVGLLT AVLLWQFDWR YVLVTLLTVM VYMAFTYKAT QWRIEIRRRM NDSDSDANTK
AIDSLLNYET VKYFSAETRE ADRYDRSMER FETASVQTYT SLAVLNAGQA VIYTAGLTTV
MIMCAIGVRN GTHTVGDFVM VNAMMIQLYQ PLNLMGMVYR EIKQAIIDIE KMFSVLTRRA
EVQDRPGAQP LRVESGAVKF EDVLFAYDPD RPILKGLTFD VPAGKTVAIV GPSGAGKSTL
SRLLFRLYDV SSGRILIDGQ DIRDVTQESL RAAIGMVPQD TVLFNDTIRY NIRYGRWDAT
DEEVEAAART AQIDGFIRMS PKGYETEVGE RGLKLSGGEK QRVAIARTVL KAPPILVLDE
ATSALDSHTE HEIQEALERV SRNRTSLVIA HRLSTIVGAD EIIVLDQGRI AERGTHAELL
AAGGLYASMW NRQREAEEAR EKLALIGDEE GAPNRAPPPV DDPLVAPTGA AG