Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1216 |
Symbol | |
ID | 3675675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 1336464 |
End bp | 1337552 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637712766 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_317830 |
Protein GI | 75675409 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC GTGATTTTTT GAAAGGATCG GCAGCCGGGG CCGCCGTCTC GGCCGTGGCC TCGCCGGCGA TCGCTCAATC GGCGCCCGAG ATCAAATGGC GCATGACGTC AAGCTTTCCC AAATCGCTCG ACACGATCTA CGGCACGGCC GCGGTCTTTG CAAAGCAGGT CGCGGAAATG ACCGACAACA AATTCCAGAT CCAGCTGTTC GCGGCAGGAG AGGTCGTTCC CGCGTTGCAG GCGCTCGATG CGACGGCCAA CAATACGGTC GAGATGAGTC ACACCGCTTC GTACTATTAT GTCGGAAAGG ATCCCACCTT CGCGATCTTC GCGTCAGTTC CGTTCGGGCT CAATGCGCGT CAGCAGAATT CCTGGCTGTT TCAGGGCGGC GGCAATGAGC TTGCAGACGA GTTCTTCAAG AAATTCGGCG TTGTCGGGCT TCCCTGCGGC AACACCGGCA CACAGATGGG CGGTTGGTTC CGCAAGGAGA TCAAGACCGT GGCCGATCTG TCGGGCCTGA AGATGCGGAT CGGCGGCATT GCCGGTCAGG TCTTGCAGAA GGTCGGCGTG ATACCGCAGC AGCTTGCCGG GGGCGACGTT TATCCTTCGC TTGAGAAAGG TACGATCGAC GCGGCCGAAT GGGTCGGTCC ATACGACGAT GAGAAGCTGG GTCTCCAGAA GGTCGCCAAG TATTATTATT ATCCAGGTTT TTGGGAGGGC GGGCCGACGC TCCATGCGTT CTGCAATCTC GAGAAGTGGA ACACGTTGCC AAAGACCTAT CAGGCGATAC TGGTGAACGC GGCGAACACG GCCAACACCT GGATGACGGC TCGCTATGAC ATGCAGAATC CGACCGCCCT CAAGCGGCTC GTCGCAGGTG GCACGCAACT CAGGCCGTTC AGTCACGACG TTCTCGACGC TTGCCTGAAA GCCACGAACG AGTTGTGGGG CGAGATTTCG GCAAATAATG CGGACTTCAA GAAAGTGATC GATGCGATGC AGGCCTATCG GTCGGACGAA TATTTGTGGT GGCAGGTGGC GGAATATACC TACGACACCT TCATGATTCG ATCACGGACG CGGGGCTGA
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Protein sequence | MKRRDFLKGS AAGAAVSAVA SPAIAQSAPE IKWRMTSSFP KSLDTIYGTA AVFAKQVAEM TDNKFQIQLF AAGEVVPALQ ALDATANNTV EMSHTASYYY VGKDPTFAIF ASVPFGLNAR QQNSWLFQGG GNELADEFFK KFGVVGLPCG NTGTQMGGWF RKEIKTVADL SGLKMRIGGI AGQVLQKVGV IPQQLAGGDV YPSLEKGTID AAEWVGPYDD EKLGLQKVAK YYYYPGFWEG GPTLHAFCNL EKWNTLPKTY QAILVNAANT ANTWMTARYD MQNPTALKRL VAGGTQLRPF SHDVLDACLK ATNELWGEIS ANNADFKKVI DAMQAYRSDE YLWWQVAEYT YDTFMIRSRT RG
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