Gene Nwi_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1196 
Symbol 
ID3674424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1303301 
End bp1304017 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID637712746 
Producttwo-component transcriptional regulator 
Protein accessionYP_317810 
Protein GI75675389 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATGG AAAGACAACC TTTGGACAAT TCCAGTAACC AGATGCGCCT GCTGATCATC 
GAGGACGATC GCGAGTCCGC GGACTACCTC GTGAAGGCGT TTCGCGAGGT CGGACATATC
GCGGAACTCG CCAGAGACGG CGAGGAAGGC CTCTCCTTTG CCGACGGCGG GGACTACGAC
GTACTGGTGA TCGATCGGAT GCTGCCCAAG CGCGACGGGC TTTCCGTGAT CGGCTGCCTG
CGCGAGAAAG GCATCCTCAC TCCGGTGCTC ATTCTCTCTG CGCTCGGCCA GGTCGACGAT
CGCATCAAGG GCTTGCGCGC CGGCGGCGAC GACTATCTGC CTAAACCGTA CTCATTTGCC
GAGTTGCTGG CGCGGGTGGA GGTCCTGTCG CGTCGTCATG GCGGGCGCGC CGAAGAAACG
CTCTATCGTG TCGGCGATCT CGAACTGGAC CGGCTGTCAC GCCGCGTTGC GCGGGGTGGA
GAGGAACTGA CGCTTCAGCC GCGTGAGTTT CGCCTGTTGG AGTATCTCAT GAAGCATGCG
GGTCAGGTCG TGACCCGAAC CATGCTGCTG GAGAATGTCT GGGATTATCA TTTTGATCCG
CAGACTAACG TCATCGACGT GCATATCTCG CGGTTGCGTT CCAAGATCGA TAAAGGTTTC
GAGCAGCCTC TGCTGCACAC CATCCGTGGC GCCGGATACA TGGTGCGGAG TGGTTAG
 
Protein sequence
MVMERQPLDN SSNQMRLLII EDDRESADYL VKAFREVGHI AELARDGEEG LSFADGGDYD 
VLVIDRMLPK RDGLSVIGCL REKGILTPVL ILSALGQVDD RIKGLRAGGD DYLPKPYSFA
ELLARVEVLS RRHGGRAEET LYRVGDLELD RLSRRVARGG EELTLQPREF RLLEYLMKHA
GQVVTRTMLL ENVWDYHFDP QTNVIDVHIS RLRSKIDKGF EQPLLHTIRG AGYMVRSG