Gene Nwi_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1163 
Symbol 
ID3675798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp1274169 
End bp1274816 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID637712713 
Productpeptidase U35, phage prohead HK97 
Protein accessionYP_317777 
Protein GI75675356 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.446656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCTC CGTTGTCATC CGTGTCCCGC CTGTCGTTCT TCAGCGATGG CATGGTCGAA 
GGTTATGCCA GCCTGTTCGG CGAGATCGAT CAGGCGCGCG ACATGATGAT GCCCGGTGCG
TTCACGCAGA CGCTGAAAAC GCGGGGGCTG CGCAGGATCC CGATGCTGTT CCAGCATGAT
CCCGCGGAGC CGGTCGGCGT CTGGCTCGAA CTGCACGAGG ATTTTCGCGG CCTCTGGGCG
CGGGGAAAGC TGATCCCCGA CGTGACGCGC GCGCGCGAGT TGCTTTCTTT AGTCGAGGCC
GGCGCGGTGG ATGGACTGTC GATCGGCTAT CGCACCGTGC GCGGCCGGAT CGAGCCGCGC
ACGCGCGTGC GTCATCTCCA TCAGGTCGAT CTGTGGGAGA TTTCGATCGT CACCTTCCCG
CTGCTGGCGG GAGCGCGTGT CCGCGCCGTG AAGCAGGCGA CGCCCCCGTC GCCGCGCTCG
CGTGCGCGGA CACAGGCCGA GCGCGAATGG CGGAGCATGA GGCAGGCCGC GGATGAACCG
GCGCCGTCGC TCCGCCCGCG CCCGGTGGTG ACGTCGCTGC GTGGCAGGGA AGGACGACGC
GTGGCGCTGT GCGGCGCGAT GCGCGCGCCG CTGGCGGGAG CACGCTGA
 
Protein sequence
MHAPLSSVSR LSFFSDGMVE GYASLFGEID QARDMMMPGA FTQTLKTRGL RRIPMLFQHD 
PAEPVGVWLE LHEDFRGLWA RGKLIPDVTR ARELLSLVEA GAVDGLSIGY RTVRGRIEPR
TRVRHLHQVD LWEISIVTFP LLAGARVRAV KQATPPSPRS RARTQAEREW RSMRQAADEP
APSLRPRPVV TSLRGREGRR VALCGAMRAP LAGAR