| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0946 |
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| Symbol | |
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| ID | 3674944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 1037949 |
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| End bp | 1040795 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637712495 |
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| Product | alpha amylase |
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| Protein accession | YP_317560 |
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| Protein GI | 75675139 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.206835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.69662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTG ATCGATCGGA CCAGCCTGAC CGCAAGCCGA TCCCGCGCGC CACCTACCGG
TTGCAACTTA ACAAGGACTT CGGCTTCGAC CAGGCCGCGG CGCTTGCGCC TTATCTCGCC
AGGCTAGGAA TAAGCCATGT CTATTGCTCG CCCTATCTGC GGGCACGCCC CGGCAGCACC
CATGGCTACG ACATCGTCAG CCACACCGAG CTGAATCCGG AGTTGGGCGA CACCGCGGCC
TTCGAGCGGA TGGTTGCCGC GTTCCGGACG AACGGTCTCG GCCAGATTCT TGATTTCGTC
CCGAACCACA TGGGGGTGGG CGGCGCGGAC AACCCGTGGT GGCTGGACGT GCTCGAATGG
GGACCGGATT CGCAATTCGC GGGCTGGTTC GATATCGACT GGGAGTCGGA TCGCCGTTAC
CTGCTAGGCA AGCTGCTTGT GCCGTTTCTG GGCGATCAGT ACGGCGCCGA GTTGCAGTCG
GGCGCGCTCC GCCTGAGGTT CGATGCCGAA GCCGGATCCC TCGCCGTATG GGCATATGAA
ACCCACAAGC TGCCCATTAG CCCGCTTCAT TACGAACGCA TTCTCGGCGA TCGTCATCCG
GACCTTGAAC GCATCGGCGA TGCGTTTGCC CATCTCTCGA CATGGCGGCC GCATATCGAC
CGCCGGGCTG CCGATCTCAA ACTGGAACTG GCCGAGTCCG TTCGGTGCAA TCCCGATCTG
GCGGTCGCGA TCGAGGCCGC GGTGGACCGG TTCAACGGCG AGGCTGGCGA CCTGCAAAGC
TGGTCGAAGC TGGACGCGCT GATCCGCGAC CAGCACTGGC GCGCGGCCCA CTTCCGCGTC
GCGGCCGACG ACATCAACTA CCGGCGTTTC TTCAACATCA ATGACCTGGC CGGGGTCCGG
ATGGAGTTGC CCCAGCTTTT CGACCACGCG CATTCGCTGG TGTTCCGGTT GCTCGAGCAG
GGCGTGCTCG ACGGAATCCG GCTGGACCAC GTCGACGGAC TTCTCGATCC GAAGGGATAC
TTTTCACGCC TGCGGGAGAA GGCCCCGCGT CCATTTTATC TCGTTGTCGA GAAGATCCTC
GCCTCTCATG AAAACCTTCG GGATGACTGG GATGTCGAGG GGACGACCGG TTACGAGTTC
ACGAACCTTG TGACCGGTCT TCTGAACGAC CCCGCAGGTC AGGAGAATCT CACTCGCCTC
TACGCCGACT TCACCGGTGA GCGGGCGTCG TTCAGCGACA TCGTCCGCGA TTCGAAAATG
CGGATCATGG AAAACGAGAT GGCGAGCGAA CTGAACGTGC TGGCCAGGGA GGCGGCGCGG
GTGGCGCGCT CGAACCCGCG GACCGCCGAT TTCACCAACA ACGTCCTGCA GCGGGCGCTG
AAGGAAATCA TCGCGGTCTT CCCCGTCTAC CGCACCTATG TTGACGGGTG CGGCGCGCCG
ACCCCTGCCG ACCGCCGCGA TATTGATTGG GCCATGGCGC AGGCCCGCCG CAATGGCGCC
GCCCTGGACC CCAGCGTTTT CGATTTCCTC CACCAGCTAC TGACCTGCGA CCTCGTCGCC
GGGCCGCGCA GCGGCTTCAG CCGGGTGGAG GTGGTCCGTG TCGCCATGCG CGCACAGCAA
TACAGCGGCC CCGTGATGGC CAAGGGGCTC GAGGATACCG CCTTCTATCG CTACAACCGG
ATGCTGGCGC TGAACGAGGT CGGCGGCCAC CCCGACCAGT TCAGCGTAAG CATATCCGCC
TTTCATCATG CCAACGCGCA GCGGGCGAAA CGAACGCCGC ATGCCATGCT GAGCACCGCC
ACGCACGACA CCAAGCGCGG CGAGGATACG CGCGCGCGGC TGGCGGTGCT GTCGGAGATA
CCGGACGACT GGGCTCAGCA CGTTGCGCTG TGGAGCCGGA TGCTGCGGGC GCGCAACGCA
GGAAATGCCG ACGAAGTGCC GCCCGATCGC AATGACGAAT ATGCGTTCTA TCAACTCCTG
CTTGGGGTAT GGCCGGCCCG ACTCTCGGCG GGCCAGCTTG ATCCGGGGGA AGTGGACGCA
TTTCGCCAGC GGATCGAAGG CGCCATGACG AAAGCCATGC GCGAAGCCAA GGTCCATACG
ACCTGGGCCG CGCCAAACGC CGCATACGAA GACGCCGTGC TGGAGTTCAT TGGCTATGCG
CTGGACACCT CGCGCACCAA TCCCTTCCTT GAGTCCTTTT CTGCGTTTCA GCAGCGCGTG
GCCACCCTTG GCGCTTTGAA CAGTCTCATT CAGGTTGTGC TGAAACTCAC GGCGCCCGGC
GTGCCGGATA TCTATCAGGG CACGGAGCTC TGGGACTTCA GCATGGTCGA TCCGGATAAT
CGTCGCGCCG TCGATTACGA CACCCGGAGA ACATCACTGG CATCCCTGGA ATCCGGCGAG
GGTGATCTTG CGGAGCTTCT TGAAAACTGG CGTGACGGCC GTTTGAAACT CCGCCTCATT
GCCGAGACGT TGGCGCTGCG CCGGCGCGAA CCCGAACTGT TCGTGGACGG CTCCTATGAA
GCGCTCCCTG CCACAGGGCC GCAGGCCGAC CGTCTCTGCG CATTCATGCG CGCGGGCGAA
CATAGCGCGC TGGTGACCGC GGTAGCTCTG TACCCGTCCC GTGGGCATCA GGCTGAGACG
TGGGGTGACT GCAACCTCGC TCTGCCGTCC GAGGCCGCTC CGCAGCGATG GACTGAACTG
TTCAGCGGAC GTGAACTCAC GCTTTCGCAA GGATCGCTTC TGGCCCGCGA CCTGTTCGCC
AGCCTCCCTG TGGCGCTGCT TACGCCTTCC GCCTCGGATT CCACCAGAAG CGGAAAGGCT
CTGGCGGCGG AGCCCGTGAT AGTCTAA
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| Protein sequence | MTLDRSDQPD RKPIPRATYR LQLNKDFGFD QAAALAPYLA RLGISHVYCS PYLRARPGST
HGYDIVSHTE LNPELGDTAA FERMVAAFRT NGLGQILDFV PNHMGVGGAD NPWWLDVLEW
GPDSQFAGWF DIDWESDRRY LLGKLLVPFL GDQYGAELQS GALRLRFDAE AGSLAVWAYE
THKLPISPLH YERILGDRHP DLERIGDAFA HLSTWRPHID RRAADLKLEL AESVRCNPDL
AVAIEAAVDR FNGEAGDLQS WSKLDALIRD QHWRAAHFRV AADDINYRRF FNINDLAGVR
MELPQLFDHA HSLVFRLLEQ GVLDGIRLDH VDGLLDPKGY FSRLREKAPR PFYLVVEKIL
ASHENLRDDW DVEGTTGYEF TNLVTGLLND PAGQENLTRL YADFTGERAS FSDIVRDSKM
RIMENEMASE LNVLAREAAR VARSNPRTAD FTNNVLQRAL KEIIAVFPVY RTYVDGCGAP
TPADRRDIDW AMAQARRNGA ALDPSVFDFL HQLLTCDLVA GPRSGFSRVE VVRVAMRAQQ
YSGPVMAKGL EDTAFYRYNR MLALNEVGGH PDQFSVSISA FHHANAQRAK RTPHAMLSTA
THDTKRGEDT RARLAVLSEI PDDWAQHVAL WSRMLRARNA GNADEVPPDR NDEYAFYQLL
LGVWPARLSA GQLDPGEVDA FRQRIEGAMT KAMREAKVHT TWAAPNAAYE DAVLEFIGYA
LDTSRTNPFL ESFSAFQQRV ATLGALNSLI QVVLKLTAPG VPDIYQGTEL WDFSMVDPDN
RRAVDYDTRR TSLASLESGE GDLAELLENW RDGRLKLRLI AETLALRRRE PELFVDGSYE
ALPATGPQAD RLCAFMRAGE HSALVTAVAL YPSRGHQAET WGDCNLALPS EAAPQRWTEL
FSGRELTLSQ GSLLARDLFA SLPVALLTPS ASDSTRSGKA LAAEPVIV
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