| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0941 |
|---|
| Symbol | |
|---|
| ID | 3674939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 1031582 |
|---|
| End bp | 1033732 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637712490 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_317555 |
|---|
| Protein GI | 75675134 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATTGT CAATGAATTG CATGAGCAGG GGCGCGCTCC TGTCGTCGGT CGCGATTTTT
GCGATGACGG CCGGTGCGGA GGCGCAGGAT CGCGACCAGA GTCGTGACAG TGTTTATCAA
CTTGGCGAGA TCTATGTTTC CGGCGGAGGG CGCAGCGGCA GCGGGAGCGG AGGTGGCGTC
GGCGGCTCGA CGGTGACGCG CGAGCAAACA TGGACCTTCG AAAAGCAGAC GCTCGATCAA
GCCGTGAACC TCGTGCCTGG CGTCAACGGC ACGCAGTCGG CCAATGGCCA GCGTAACGAG
ACCGACATTT TCGTGCGCGG TTTCGGTCGC TGGCAAGTCC CGCTGATGAT CGATGGCGTG
CGCGTCTATC TTCCCGCCGA CAACCGGCTG GATTTCAGCC GCTTCCTCAC CGGCGACATC
GCCGAAATCC AGATTCAGAA GGGGTATGCC TCGGTGCTCG ACGGGCCGGG CGGGATGGGC
GGGGCCATCA ACCTGGTGTC GATTAAACCG GTCAAGGCGT TCGAGTCTGA ACTCAACGCC
GGTACGATGT TCGACAATCG GGGAGCATTC CAGGGCTGGA ACAGCTATGC GAGAGTCGGA
TCGCGCCAGG AGAAATTCTA CGTTCAGGGC AGCGTCAACC AGCTCGACCA GGATTTCTGG
TCGCTGTCGC GCGGCTATTC GCCATATCCG GCGCAAGGCC CTTACGCCGG CTCGCTCGAG
GATGGCGGAC GGCGCAACGG TTCGGATACC CGCGACTGGC GAATTAACCT CAAGGCAGGC
TACACGCCGA ACGAAACCGA CGAATACAGC ATCAACTATA TCAAGCAGTC CGGCGCCAAG
GGCGCGCCGC TGAACGTCTA CAACAATCCG CCGTCGAGCC AGAACAGCTT CTGGCTGTGG
CCGAAATGGG ATGTCGAGAA CCTGTCCTTC CTGTCGAACA CCCAGCTCGG CGACGCCTCC
TACGTCAGGA CCAAGCTTTA CTACAACACG TTCTACAATC TGCTTTCGGC GTATGACGAC
ATCACCTACT CGTCGCAGTC GAATAACGGC CGCTTCAATA GCTATTATGA CGACAGCGCG
CGTGGCGGCT CGGTCGAGGC CGGCACCGAG TTGATCCCGA TGAACACGCT GAAGACGGCG
TTCCATTATC GACAGGATTT CCACGCCGAG TGGAATCACA ACCGGCCGAC CCATCCGACG
ATGGCTATGC TCGAACCGAG GCAGAACCAG GCGCAGACGA CCTGGTCGAT CGCCGGGGAA
GATACCTTCC ACGTCACTCC CGACTTCGAT CTGGTGGCGG GCATCAGCTA CGACAAATAT
TCGATCAACA GAGCCGAGGA GTGGGACAGC GGCGGCGGGT TCATCTATGA ATATCCGAAG
GGGGGCTCCG ATGCCCTGAA CTGGCAGACG GCGGCGATCT GGCGCTACAA CGAGACCGGC
CAGGTTCATT TCAGCGTATC CGACCGTACG CGTTTTCCCA CCATCTTCGA GCTTTACAGC
CAGCGTTTCG GTACCGCGAT TCCGAATCCC AATCTCGGTC CCGAGCGCGC CACCAACTAC
GAACTTGGCT GGAAGGGTCA GATCGCTTCT AACGTGAAGG GAACGGCGGC GATCTTCTAC
AGCGACGTGC GCGACCTGAT ACAGGCGGTT CGCGTCAGCC CGACTCAGTC GCAAACGCAG
AATATCAATC AAGGACACTT CTACGGATTT GAGGCATCGT TCGAAGCGCA ACTCTCCGCG
CAGTTCATGA TCGGCGGCAA CTACACTTTT ATAGAGCGAA ACGTCAGCGA CGTATCCGTG
CCCGGATTCC AGCCGGTCGG CGTGCCGACC CAGAAGGCGT TCCTCTATGC AACGTGGCGG
CCAATCGAGC CGCTTGCGAT CACGCCAAAT CTCGAGGTCA CGAGCGACCG CTGGAGCGAC
GTCCTTGTCG GCACGCAGGG ACCGAACGCG CCGATCCGCG CCGCGTTTCC TGATCTCTAT
ATCCGCACCG GGGCCTATAC GCTCGCCAAC ATCAACGTGA ACTACAAGTT CACTGAGAAT
GTTGAGGTGG CGGGCGGTGT AAGGAACCTG CTCGACCAGA ACTACGAGCT TGCGTGGGGA
TTACCGCAGC CGGGACGCAC CTTCTACCTG AAGGCGCGTG CCAGATTTTA G
|
|---|
| Protein sequence | MILSMNCMSR GALLSSVAIF AMTAGAEAQD RDQSRDSVYQ LGEIYVSGGG RSGSGSGGGV
GGSTVTREQT WTFEKQTLDQ AVNLVPGVNG TQSANGQRNE TDIFVRGFGR WQVPLMIDGV
RVYLPADNRL DFSRFLTGDI AEIQIQKGYA SVLDGPGGMG GAINLVSIKP VKAFESELNA
GTMFDNRGAF QGWNSYARVG SRQEKFYVQG SVNQLDQDFW SLSRGYSPYP AQGPYAGSLE
DGGRRNGSDT RDWRINLKAG YTPNETDEYS INYIKQSGAK GAPLNVYNNP PSSQNSFWLW
PKWDVENLSF LSNTQLGDAS YVRTKLYYNT FYNLLSAYDD ITYSSQSNNG RFNSYYDDSA
RGGSVEAGTE LIPMNTLKTA FHYRQDFHAE WNHNRPTHPT MAMLEPRQNQ AQTTWSIAGE
DTFHVTPDFD LVAGISYDKY SINRAEEWDS GGGFIYEYPK GGSDALNWQT AAIWRYNETG
QVHFSVSDRT RFPTIFELYS QRFGTAIPNP NLGPERATNY ELGWKGQIAS NVKGTAAIFY
SDVRDLIQAV RVSPTQSQTQ NINQGHFYGF EASFEAQLSA QFMIGGNYTF IERNVSDVSV
PGFQPVGVPT QKAFLYATWR PIEPLAITPN LEVTSDRWSD VLVGTQGPNA PIRAAFPDLY
IRTGAYTLAN INVNYKFTEN VEVAGGVRNL LDQNYELAWG LPQPGRTFYL KARARF
|
|---|
| |