Gene Nwi_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0838 
Symbol 
ID3676279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp918447 
End bp919307 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content60% 
IMG OID637712389 
Productintegrase, catalytic region 
Protein accessionYP_317454 
Protein GI75675033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.204021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00436144 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCCGACC TTCCGACGGG ACCGAAAGAT CCGCGCTCGA CGGTGCTCTC ATCCGAGGAG 
GAGGCGATCA TCGTCGCCTT CCGCAAGCAT ACCCTGTTGC CGCTCGATGA TTGCCTCTAC
GCGCTTCAGC CAACGATCCC GCACCTGTCG CGGTCTTCAT TGCATCGCTG CCTGCACCGT
CACGGCATCA GCCGGCTCCC GGAGGTCGAA GGCGACAAGC CGATCAGGAA GACGTTCAGG
AGCTACCCGA TCGGCTACTT CCACATCGAC ATCGCCGAGG TGCAGACGGC TGAGGGCAAG
CTGCGCCTGT TCGTGGCCAT CGACCGCACT TCGAAGTTCG CCTACGCCGA GCTCCACCAA
GAGGCGGGCA AGATGGTCGC GGCTCAGTTC CTGCGCAACC TCATCGTGGC AGTTCCCTAT
GCCATCCACA CGGTGCTGAC GGACAACGGC ATCCAGTTCA CCAACCACGC CCGTCACAAA
TATGCGTTCC ACCACATCTT CGATCGCGTC TGCGACGAGA ACGGCATCGA GCACAGGCTC
ACCAGGATCA ACCATCCCTG GACCAACGGA CAGGTGGAAC GGATGAACCG CACCATCAAG
GACGCCACCG TCAAGCGCTT CCACTACGAC AATCATGACC AACTGCGCCG GCACCTTCAG
GACTTCATCA AGGCATACAA CTTCGGCCGA AGGCTGAAGA CGCTCAAAGC GCCTCACACC
CTACGAGTTC ATCTGCAAAC GATGGACTTC AGAGCCCGAT CGATTCATCA TCGATCCAAT
CCATCAAATG CCGGGACTGA ACACCATGCC GCCTTTGGAG CGGCCGATGG CCTGGCTCTG
AGTCCCCCTT TTGCGCCCTG A
 
Protein sequence
MADLPTGPKD PRSTVLSSEE EAIIVAFRKH TLLPLDDCLY ALQPTIPHLS RSSLHRCLHR 
HGISRLPEVE GDKPIRKTFR SYPIGYFHID IAEVQTAEGK LRLFVAIDRT SKFAYAELHQ
EAGKMVAAQF LRNLIVAVPY AIHTVLTDNG IQFTNHARHK YAFHHIFDRV CDENGIEHRL
TRINHPWTNG QVERMNRTIK DATVKRFHYD NHDQLRRHLQ DFIKAYNFGR RLKTLKAPHT
LRVHLQTMDF RARSIHHRSN PSNAGTEHHA AFGAADGLAL SPPFAP