Gene Nwi_0699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0699 
Symbol 
ID3676922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp779231 
End bp780124 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content61% 
IMG OID637712250 
Productphosphatidylserine decarboxylase 
Protein accessionYP_317317 
Protein GI75674896 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00163] phosphatidylserine decarboxylase precursor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.671844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.323939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGC TGATCTCGGC CCTGACCGAG CAGGAGGATA TGAATTTCCT GCTGACCAAC 
CGGATTCCGC GGGCCATGCT GACCCGGTTT ATGGGATGGT TCGGCAAGAT CGAGCAGCCC
CTGATCCGGG ATCTCTCGAT CGCGTGCTGG CGTCTGTTCT CCGATCTCGA CCTGAGCGAA
GCACGCAAAT CCAGCTTCAA GAGCCTGCAT GATTGTTTTA CGCGGGAGTT GCTTCCGGGT
TCGCGCCTGC CGGATCCTGA TCCCGCGATT GTGGTCAGCC CCTGCGACGC CATCGTCGGG
GCGTTCGGGA AGGTGGCGGA TACGGAGCTT TTTCAGATCA AGGGCGCGCC TTATTCGCTA
CCGGACCTGC TCGGCGATCC GGCGCTGGTC GAGGCCCACC GGAATGGCCG CTTCATCACC
CTGCGGCTGA CGTCGAGCAT GTACCATCGC TTTCATGCGC CGCACGATTG CCGGATCGAT
CGGGTCACGT TCATTCACGG CGACGTATGG AACGTGAACC CGATCGCATT GAAGCGGGTC
GAGCGGCTGT TCTGCAAGAA CGAGCGGGCG GTGCTTCAGG CGCGGCTGAT AACCGGCGAG
ACGCTGACCC TGGTGCCGGT GGCGGCGATT CTGGTCGCGA GCATTCGGCT GCACTTCATC
GATGCCACCC TCAACGCTCG AACCAGGGGA CCGACGGTTT TTTCCTGCGA TGCGAGCGCT
CGAAAAGGCG ACGAACTCGG CTGGTTCGAG CACGGATCGA CGATCATTGT GCTGGCGTCG
GATGAATTCG ATTTCTGCGA CAATGTGGTG GAATCGGCGC GACTTAAGGC GGGTCAGCCT
CTCATGCGAA GGGTTGCCGG GGACAGGATG GCGGGAACGC AGAATCGAAT CTGA
 
Protein sequence
MRKLISALTE QEDMNFLLTN RIPRAMLTRF MGWFGKIEQP LIRDLSIACW RLFSDLDLSE 
ARKSSFKSLH DCFTRELLPG SRLPDPDPAI VVSPCDAIVG AFGKVADTEL FQIKGAPYSL
PDLLGDPALV EAHRNGRFIT LRLTSSMYHR FHAPHDCRID RVTFIHGDVW NVNPIALKRV
ERLFCKNERA VLQARLITGE TLTLVPVAAI LVASIRLHFI DATLNARTRG PTVFSCDASA
RKGDELGWFE HGSTIIVLAS DEFDFCDNVV ESARLKAGQP LMRRVAGDRM AGTQNRI