Gene Nwi_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0622 
Symbol 
ID3676051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand- 
Start bp702309 
End bp702950 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID637712173 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_317241 
Protein GI75674820 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.318337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CCACGGACAT CAAACACACA AGCCAGTTAA CGTCCGGTGA TTTCACGGAA 
GCCCGAGAGC CTTTTGCCCT TTTCGAGGCG TGGCTCGCGG AAGCCACAGC ATCGGAACCC 
AACGATCCCG ACGCCATGGC GCTCGCCACC GCGGATGCCG ACGGCCTGCC CGATCTGCGC 
ATGGTGCTGA TGAAAGGCTT CGATGCCAGG GGCTTCGTAT TCTACAGCCA CATCGCCAGC 
GCCAAGGGCC GCGAACTCGC CGCGAACCCG AAAGCGGCGC TTCTCTTTCA CTGGAAGTCG 
CTACGCCGGC AGGTGCGCGT GCGCGGGCCG GTGACGCCCG TTACCGATGC GGAAGCCGAC 
GCCTATTTCG CCACCCGCCC AAGGCAGGCG CAGATCGGCG CCTGGGCCAG CAGGCAGTCG 
CGTCCGCTCG AAAGCCGCCT CGCGTTCGAG CAGGCAATCG CGAAGGAGGC CGCAAAATAC 
GCCATTGGCG CCGTGCCTCG GCCGCCGGGC TGGAGCGGCT GGCGGATCAC GCCCTTGCAG 
TTTGAATTCT GGCACGACCG TCCCTTCCGC CTGCACGACC GCATCGAATT CCGCCGCTCC 
GCGCTCGACG TGCCGTGGAC CAAGACAAGG CTGTATCCAT GA
 
Protein sequence
MNDTTDIKHT SQLTSGDFTE AREPFALFEA WLAEATASEP NDPDAMALAT ADADGLPDLR 
MVLMKGFDAR GFVFYSHIAS AKGRELAANP KAALLFHWKS LRRQVRVRGP VTPVTDAEAD 
AYFATRPRQA QIGAWASRQS RPLESRLAFE QAIAKEAAKY AIGAVPRPPG WSGWRITPLQ 
FEFWHDRPFR LHDRIEFRRS ALDVPWTKTR LYP