Gene Nwi_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0608 
Symbol 
ID3676037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp687977 
End bp689191 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content62% 
IMG OID637712159 
Productacyl-CoA dehydrogenase 
Protein accessionYP_317227 
Protein GI75674806 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTC GTCCGCAGAG CAAGGACAAG CCCGCGCCGG TCAGTTTCCA ATGGGATGAT 
CCGTTCAGGC TGGACGATCA GTTGACCGAA GACGAGCGCA TGATCCGCGA CACCGCGCGG
GCCTATGCGC AGGACAAGCT GCTGCCACGC ATCGTTAAAG CCTATCAGGA CGAGAAGACC
GACCGCGAGA TCTTCAATGA GATGGGCGAG CTTGGTCTGA ACGGCATCAC CCTTCCGCAG
GAGTATGGCT GCGCGGATGC CAGCTACGTC GCTTATGGCC TCGTCGCGCG CGAGATCGAG
CGCGTGGACT CCGGTTATCG CTCGATGAAT TCGGTGCAGT CCTCGCTGGT GATGTATCCG
ATCTATGCCT ATGGCGACGA GAATCAGCGC AAGAAGTATC TTCCCCGGCT CGCGACCGGG
GAATGGGTCG GCTGTTTCGG ACTGACCGAA CCGGACGCCG GTTCTGATCC CGGCGGCATG
AAAAGCCGCG CTGAGAAAGT GTCGGACGGC TATCGGCTGA CCGGTTCGAA GACGTGGATC
TCCAACGCGC CGATCGCGGA TTTGTTCGTA GTCTGGGCAA GGTCGGCGGC GCATGACAAC
CAGATCCGCG GCTTCGTGCT CGAAAAGGGA ATGAAGGGCC TCTCCGCTCC GAAGATCGGC
GGCAAGCTCA GCCTGCGGGC GTCGGTCACC GGCGAGATCG TGATGGATGG CGTCGTGGTG
CCGGAGGAGA ACCTGCTGCC GAACGTATCC GGACTGAAAG GCCCGTTCGG TTGCCTGAAC
CGCGCGCGCT ACGGCATTTC GTGGGGCGTG ATGGGCGCGG CGGAAGACTG CATGCACCGC
GCGCGGACGT ACGTGCTCGA ACGAAAGCAG TTCGGCCGCC CGCTGGCGGC GGCGCAACTG
GTGCAGAAGA AGCTCGCGGA CATGCAGACC GATATCGCGC TTGGGCTTCA AGCTACCTTG
CGCATCGGAC GGTTGATGGA CGAGGGCAGG ATGACGCCGG AAATGATCTC CATCATCAAG
CGCAACAATT GCGGCAAGGC GCTCGATATC GCGCGGGCCG CGCGCGATAT GCACGGCGGC
AACGGGATTC AGATCGAATA TCATGTGATG CGCCACGCCG CGAACCTTGA GGCCGTCAAT
ACGTATGAAG GCACCCACGA CGTCCATGCG CTGGTGCTAG GCCGCGCCAT CACCGGCATC
CCGGCGTTTT CCTAA
 
Protein sequence
MSVRPQSKDK PAPVSFQWDD PFRLDDQLTE DERMIRDTAR AYAQDKLLPR IVKAYQDEKT 
DREIFNEMGE LGLNGITLPQ EYGCADASYV AYGLVAREIE RVDSGYRSMN SVQSSLVMYP
IYAYGDENQR KKYLPRLATG EWVGCFGLTE PDAGSDPGGM KSRAEKVSDG YRLTGSKTWI
SNAPIADLFV VWARSAAHDN QIRGFVLEKG MKGLSAPKIG GKLSLRASVT GEIVMDGVVV
PEENLLPNVS GLKGPFGCLN RARYGISWGV MGAAEDCMHR ARTYVLERKQ FGRPLAAAQL
VQKKLADMQT DIALGLQATL RIGRLMDEGR MTPEMISIIK RNNCGKALDI ARAARDMHGG
NGIQIEYHVM RHAANLEAVN TYEGTHDVHA LVLGRAITGI PAFS