Gene Nwi_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0557 
Symbol 
ID3676901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp626435 
End bp627643 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content64% 
IMG OID637712102 
ProductNnrS 
Protein accessionYP_317176 
Protein GI75674755 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3213] Uncharacterized protein involved in response to NO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.042435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGT CGGACGTGGA GAACGCGAAA GCGGAGCCGC TGGCGATCTG GACGATCGGC 
TTCAGACCGT TCTTCCTGAT GGCCGGCATC TGGTCGGCGG TGGCGCTCGC CGGATGGATC
GCCGTGCTCA CGATCGGGCT CACGCTGCCA AGCCGCTTCG ATCCGCTCAC ATGGCATATC
CATGAAATGC TGTTCGGGTT CGTCCTGGCG GCGATTGCCG GTTTTCTGCT GACCGCGATT
CCGAACTGGA CCGGCCGCCC GCCGATCAGC GGCCGGCTGC TCGCCGCGCT CGTGATGTTA
TGGTTCGCGG GTCGCGTCAC CTGTCTCGTT TCAGCGTGGT TCCCGCTCGG GCTGGCGGCC
GCGATCGATC TGGCCTTCCC GTTCGTGCTT TGCGGAGTTG TCGCTCGCGA AATCATCGCG
GGCCGCAACT GGCGCAACAT GATCATGCCG ATCCCTGTCG CCATGCTCGG CGTCGCCGAT
CTTCTTATGT ATCTGGAGCT GTCTGGTTCT TCCCTGTCCG TGGGTCTTGG ATGGCGTCTC
GGACTGGCCG CGATCATCGT TCTGATCTCG GTCGTCGGCG GCCGGATCAT CCCGAGTTTC
ACGCGCAACT GGCTCATCAG GCAGAATGCT TCCCGCCTTC CGCCCGCGCA CGGCCACGTC
GATAGCCTCG CGCTCGTGTC CCTCCTTGCC GGAATGATCG GATGGGCGCT CTTTCCTGAG
CGCTGGCCTT TCGGCTGGTT GTTGCTTGTC GCCGCCGCGC TGAATCTCTG GCGGCTCGGG
CGCTGGCGGG GCCCGGCCGT CGGCGCTGAA CCGCTGTTGA CTATTCTTCA CGCCGGATAC
CTGTGGGTCA TTATCGGTGC GGCATTGCTT GGCGCTTCGA TGCTGGCCGA TCATGTGCCT
CAGGCCGCTG CGATCCACGC GCTGACCGCC GGTGCCATCG GCACGATGAC GCTCGGCGTC
ATGACCCGCG TTTCGCTCGG CCACACCGGA CGCGCCCTCA CAGCGGATCG GATCACGGGC
CTGATCTATC TGCTGGTGAT CCTCGCCGCC ATCGCGCGGG TCGCTGCCTG GGATGGCGGT
TCGTCGGCGA TGTTGATCGA GATATCAGCC GTGCTGTGGA TCGGCAGCTT CGGCCTTTTC
GTGTTGCGAT ACGGACCGAT ACTGCTGTCG CCCCGCGTGA AGTCGGTGGA CATTCAGCCT
CGCCGGTAA
 
Protein sequence
MAMSDVENAK AEPLAIWTIG FRPFFLMAGI WSAVALAGWI AVLTIGLTLP SRFDPLTWHI 
HEMLFGFVLA AIAGFLLTAI PNWTGRPPIS GRLLAALVML WFAGRVTCLV SAWFPLGLAA
AIDLAFPFVL CGVVAREIIA GRNWRNMIMP IPVAMLGVAD LLMYLELSGS SLSVGLGWRL
GLAAIIVLIS VVGGRIIPSF TRNWLIRQNA SRLPPAHGHV DSLALVSLLA GMIGWALFPE
RWPFGWLLLV AAALNLWRLG RWRGPAVGAE PLLTILHAGY LWVIIGAALL GASMLADHVP
QAAAIHALTA GAIGTMTLGV MTRVSLGHTG RALTADRITG LIYLLVILAA IARVAAWDGG
SSAMLIEISA VLWIGSFGLF VLRYGPILLS PRVKSVDIQP RR